Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02252 ATGGAACACATTTTGGATGGTAGCTCATATGTCAAAGCCGCCAAGAAGTTGCACGAGATTGATCTGTTGCAAAAGCCTAAACAGGGCAAATATGCACTTAAGACTTCACCTCAATGGCTTGGCCCTTTGATTGAAGTGATTAGATTCTCAACCAAATCAATTGAGAAGGAAATTAACTCTGTTAACGACAACCCTTTGATTGATATGTCAAGGAACAAGGCTTTGCATGGTGGTAAGTGTAGAAACCCCAGCTTGGATTATGGCTTCAAGGGAACTGAAATCGCAATGGCTTCTTACTGTTCCGAATTGCAATATCTTGCAAACCCGGTAACTAGCCATGTCCAAAATGTTGAGCAACATAACCAAGATGTGAACTATCTTGGTTTGATTTTAGCTAGGAAAACAAATGAAGCTGTTGAGATTCTCAAACTTATGTCATCGGCTTatgtaacaccctaa 459 0.39 MEHILDGSSYVKAAKKLHEIDLLQKPKQGKYALKTSPQWLGPLIEVIRFSTKSIEKEINSVNDNPLIDMSRNKALHGGKCRNPSLDYGFKGTEIAMASYCSELQYLANPVTSHVQNVEQHNQDVNYLGLILARKTNEAVEILKLMSSAYVTP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02252 152 PANTHER PHENYLALANINE AMMONIA-LYASE 80 150 - -
Aip10g02252 152 PANTHER HISTIDINE AMMONIA-LYASE 1 79 IPR001106 -
Aip10g02252 152 SUPERFAMILY L-aspartase-like 1 149 IPR008948 GO:0003824
Aip10g02252 152 PANTHER PHENYLALANINE AMMONIA-LYASE 1 79 - -
Aip10g02252 152 Pfam Aromatic amino acid lyase 1 79 IPR001106 -
Aip10g02252 152 Pfam Aromatic amino acid lyase 81 149 IPR001106 -
Aip10g02252 152 Gene3D Fumarase/aspartase (Central domain) 81 151 - -
Aip10g02252 152 Gene3D Fumarase/aspartase (Central domain) 1 80 - -
Aip10g02252 152 PANTHER HISTIDINE AMMONIA-LYASE 80 150 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02252 Aip-Chr10 101005945 101006504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02252 1 150 Monolignol Biosynthesis Gene Families AT2G37040 62.245 1.06e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02252 K10775 - ahf:112786110 287.73