Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02239 ATGTTTTCTCTTCCCTTTTTACAGAACCCACCTCTACTGCCAATTTATTTGAGAATTCCTTTTTCAGCTTCAGAGTGTCGTCGTTCTTTCTGCTTTCATCGTGCACCACGTCTTCCCGTCGTCCTCAGCGTCGTCTCCCCCTTCATCGCTACACTTCAAGAGTTTCAATGGAGCCTCAGTTTCAGGAAGTATCAAATAGTCAAAGACACACAAGTGATCAAAATGTGCATAATGTTAGTGATCATGTGGATGAAGACGCAACTTTTGATGCGGTGGATATGGATCAATCGCATAAACTCTCGAGAAGATATTGGTAAGATCGATTTCTCAGGTCTATCTATGGAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAAACGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAAACATATGTTTGTTCTTGTGAATGGTATAGATTAGAAAAATGGAACCACATGAAAAATCGAGTTAGGGAGCCAAAACCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTGATCTTCAATGCGGTAACTGAGAGTTGGGTAGTGAGAGATTTTTGTGATGAACACAACCATGAGCTTGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATGCCAAACATATTTGGGTCATTAGCTAGCCAGTGTGGTGGGTACGAGAACGTTAATTTTTTAATTAAGGATATGCACAATCAAGTTGCGAAACAAAGAAGACAATTACCTGATGATTTAACCTCTGCAATGGCTTACTTGGAAACGCTAGCAGCAAGGGATCAAAACTTGTTCTATAGTGTTAAAAAGGGCAGAGAAGGAGTGTTTCGGCAAATTTTTTGGTGTGATGGCCGGTGTCAGTTGGATTACGATCTGTTCGGGGATGTGCTAGCATTTGACGCCACAGATAGAGAATGGAAAACAGGCTATGAAAATCCTGCAGTATTGAACCCTTCTGAACTCACAAAACATTGGGTCAAGGTGGCAGCAGAGATAGAAATCTCATTGATGACACTAATTAATTTTTAA 1158 0.3998 MFSLPFLQNPPLLPIYLRIPFSASECRRSFCFHRAPRLPVVLSVVSPFIATLQEFQWSLSFRKYQIVKDTQVIKMCIMLVIMWMKTQLLMRWIWINRINSREDIGKIDFSGLSMENICQLHFADLGLAFEFYNSYAKTRGFSVRKSRSRIVDGKVREKTYVCSCEWYRLEKWNHMKNRVREPKPETRCGCMSKLHVIFNAVTESWVVRDFCDEHNHELVVPKLARMLRSHKKMTEPDISQMNHMKEVGISMPNIFGSLASQCGGYENVNFLIKDMHNQVAKQRRQLPDDLTSAMAYLETLAARDQNLFYSVKKGREGVFRQIFWCDGRCQLDYDLFGDVLAFDATDREWKTGYENPAVLNPSELTKHWVKVAAEIEISLMTLINF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02239 385 PANTHER OS02G0262500 PROTEIN 122 347 - -
Aip10g02239 385 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 122 347 IPR031052 GO:0006355
Aip10g02239 385 Pfam FAR1 DNA-binding domain 130 219 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02239 Aip-Chr10 100292225 100293850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02239 FAR1 2.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02239 - - aip:107621046 568.926