Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02238 atgcgAGGTGAGAACGCCTCAGTGCCTCACTCTCACACGGGTCGAGCCACCGCCGTCGAGCCACCGCAGTCGAGCCACCGCAGCAGCCGTCGAGAACTGAGAACGCCTCACTCTCACACGGGTCTAGCCACCGCCGTCGAGTCACCGCCGTCGAGCCACCGCAGCAGCCGTCAAGAACTGAGAACGCTTCACTCTCACCGTGCCTTCGAGCTTCCAGAGTTCCAGGAAATCATTCAGCTATCCTTTTTCTTTCAACCTGATGGTCCAGTGATTGGAAATGGCTCTTTTAAATCGTCATTCTTATTTCCAGGAATTCTACACAAGCTATGCGCCCCTGCCTCTTCCCTCCACCCACTTCCTCTGTCTTCTTCGTCAAATGATGAACCCCCGTTTCTTCTTCTACCCCCTCTTTTCTCCGCTTCTTCCTCTACTCACTGTCCACCGAAGAATTGTCTATCCTTTCTAAGCCTTCTGGCGATGCGAATTCAGAGATTTAAGATTATTAGGTTAAGCCTTCTTCCACAACGAAAATTGGGTTTTGCTCAAAAGAAGTTGATCTTTAATGGAGCCTCGAGTTGGAAATTAGAGACCGTGGAAAGATGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACATCCCTTGGGACATAGATGACGCACTGAGGCGAGGGCTGGAAAAGCGTATATACATTCCTTTTCCGAATTTTGAGAGTCGTAAAGAGTTGTTGCGTATCAATTTGAAGACTGTGGAGGCAAGTTAG 936 0.4733 MRGENASVPHSHTGRATAVEPPQSSHRSSRRELRTPHSHTGLATAVESPPSSHRSSRQELRTLHSHRAFELPEFQEIIQLSFFFQPDGPVIGNGSFKSSFLFPGILHKLCAPASSLHPLPLSSSSNDEPPFLLLPPLFSASSSTHCPPKNCLSFLSLLAMRIQRFKIIRLSLLPQRKLGFAQKKLIFNGASSWKLETVERCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNIPWDIDDALRRGLEKRIYIPFPNFESRKELLRINLKTVEAS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02238 311 CDD AAA 199 290 - -
Aip10g02238 311 PANTHER AAA DOMAIN-CONTAINING 190 311 - -
Aip10g02238 311 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 190 311 - -
Aip10g02238 311 Gene3D - 200 292 IPR027417 -
Aip10g02238 311 ProSitePatterns AAA-protein family signature. 263 281 IPR003960 GO:0005524|GO:0016887
Aip10g02238 311 Pfam ATPase family associated with various cellular activities (AAA) 201 290 IPR003959 GO:0005524|GO:0016887
Aip10g02238 311 MobiDBLite consensus disorder prediction 41 56 - -
Aip10g02238 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 306 IPR027417 -
Aip10g02238 311 Gene3D - 293 309 - -
Aip10g02238 311 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02238 Aip-Chr10 100286433 100290924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02238 191 311 Calmodulin-binding Proteins AT3G56690 42.063 1.52e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02238 K07767 - egr:104423135 214.157