Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02228 ATGGCCAAGCACCAATTGAATTACTCCGATTGCCACAGCACCGCAATCAACACCAAGCTCCGTCGTCAGCTCCCTCCAGCTCACGATGACACCGATTATCGAACCCATCAAAGTCTTCGTTCTCGCTACCTTGCCTTCAACAACATGATTAACGATGAAAGGGACGAAATCGCAAGGGCTGATTCCAAGAAGTTTGAGTTGATATTTGGCAAAATGGAGAGTTTGCATCAACTAGATATCTAA 243 0.4568 MAKHQLNYSDCHSTAINTKLRRQLPPAHDDTDYRTHQSLRSRYLAFNNMINDERDEIARADSKKFELIFGKMESLHQLDI 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02228 80 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 28 78 - -
Aip10g02228 80 PANTHER UNCHARACTERIZED 28 78 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02228 Aip-Chr10 99884049 99884515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02228 13 77 Non-SMC Element family AT3G20760 34.328 1.19e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02228 - K22825 var:108328890 73.559