Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02227 atgtccattggtcaaggagttgacagcaaagTTACAAAACCAAGAGAACAAGTGGCTGATGCAAAAGCTCTGTTGGACATAATGAAATCCTTGGTAATGTCTATGAAGGGTCATGCTAACGGTGGAGTCACTCCTTCAGAATTTGTATCGCACATTCTTGAAGAATTTGGAGGACAGGGCAGATCAAGTACTAGCACAGAACGTTGCACCAAAAACTCAACAGCTTGGAATGATATTGGACTATCAGTATCACATGTTTTTAAAGCGGGTTCCAGCTGCTGTACAATGAACTCCTTTGCTCAAATAGTGGAGAATTTACTCGCTTTATCATTCATAGTCAAAGATGGGCGAGCTGAAATAAAAGTCAACGAGGCTGGATCACAACTAGTACTGTCACCCAGAAATTCCCCTCGTGCAAATGCAATTCGTGCTGGGGATATTGCTTTCGGTCACTTTATGTTCAGATTGGATTTTAAGGATTGGAAGGGGCGAGGAGAAGAAATGAGTGTCGGTGTGTGTGCATGTTATTTTAATGTTTTGGTAAGAGTAAAATGCCGGGGCGAGGGCAAGGACAAGAACAGTGGGGTGGTGGAGCCAGTAAGTGAGAGAGCGTTCATGCATGTAGAGGACATGGAGCTAATGTTGCTGAGAGCGTGTTCGTTCTTTCAAATTGGTCCCCCAATTTTTGTTCCTCGAGAAATCAACCCAAAGGATGATAATGTGCTTTTTGGTTTCACGATGGTTCTCCCCCACAATGGCAGAGGACTAGATCTTGTGGCTCACAGTCCGTTGTGCTACGAAGAACACTTTGCTCGTCAGAAGTTTCATTCACAATGTTGGATAAGATTCTTTCTGCCACCAGTTATACTATTCGTGATTACAACCATCGCATTGTTTTGCAGGTATCGGGTTGTAAGGGATGATCTTGCTGATGTTTTGGTTGGGCTTTTGATAACAAAGATACTTAATCTGGATCCTAATGGAATACAGTTTTCAGTTGGGTTCCCTCTAGTGAGGTCGCTAAAGGGACGGATGGTGGTGACGGGACCATTGATGACAACCATAACATCAAGTTCATCCGGATATTTCAGGAGGGAGGTCATGAAGACCCTAAATGACCACATTAGGACTATCTCTGGGATGCTGGTGGATCATGGAAAGATTCTCCAGTCTCTGATGCTTGCTGTTGGTCCACTTGCCGACCTGAAGAAGAAAGTCGTGCAAGGCAATGCACGGATGGTCGCATGTAGGAAGACACGAGCAAAGGCGGTGGATCCACAAGAGGCAACTGTGCGCAAGTTAACATTCAAAGACCAGGATTCTGCGTCAACAGAAGGTAGTGATGTCCGACAAACTGAGCATGAGTCTCCATTCGCATATCACACACACCCTGCCTTCCATGTTGCATTTGAGATGCCGCAGTGTCTCAAATTGGCATTTCGGCCACCAGAGGGAATGCATTTTCAGGGGTCGGAGTTTACTATGGCCGCTTACATTTTCTCAAAGAATCTGGATGAACGGGAGATTCTAGTTGCTGATGAGCACGCACAGGGTGTTCGGCGTACACTGTGGAGCCTACGACCGGAGCACCAAGTTGTTGATGACGTTATCAACATGGTGGCCTCCATGCTCAGCTTCGACAACATGTCTTCTAAGTGGTTCTTTCCAACCACCTTTGCACAAATTGTGCTAAGTCCTGTCAACCATAGCATTAACACTCTTAAATTCATCTGCACTAATTTCATGGGCTATGCGGATAAATTGCATCGGATATATGTTCCAATGTACAGGGAGCAACACTGGTAA 1806 0.4441 MSIGQGVDSKVTKPREQVADAKALLDIMKSLVMSMKGHANGGVTPSEFVSHILEEFGGQGRSSTSTERCTKNSTAWNDIGLSVSHVFKAGSSCCTMNSFAQIVENLLALSFIVKDGRAEIKVNEAGSQLVLSPRNSPRANAIRAGDIAFGHFMFRLDFKDWKGRGEEMSVGVCACYFNVLVRVKCRGEGKDKNSGVVEPVSERAFMHVEDMELMLLRACSFFQIGPPIFVPREINPKDDNVLFGFTMVLPHNGRGLDLVAHSPLCYEEHFARQKFHSQCWIRFFLPPVILFVITTIALFCRYRVVRDDLADVLVGLLITKILNLDPNGIQFSVGFPLVRSLKGRMVVTGPLMTTITSSSSGYFRREVMKTLNDHIRTISGMLVDHGKILQSLMLAVGPLADLKKKVVQGNARMVACRKTRAKAVDPQEATVRKLTFKDQDSASTEGSDVRQTEHESPFAYHTHPAFHVAFEMPQCLKLAFRPPEGMHFQGSEFTMAAYIFSKNLDEREILVADEHAQGVRRTLWSLRPEHQVVDDVINMVASMLSFDNMSSKWFFPTTFAQIVLSPVNHSINTLKFICTNFMGYADKLHRIYVPMYREQHW 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02227 601 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 9 96 - -
Aip10g02227 601 Pfam Nse4 C-terminal 94 163 IPR014854 -
Aip10g02227 601 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 97 167 - -
Aip10g02227 601 PANTHER UNCHARACTERIZED 9 96 IPR027786 GO:0005634|GO:0006281|GO:0030915
Aip10g02227 601 PANTHER UNCHARACTERIZED 97 167 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02227 Aip-Chr10 99872685 99882291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02227 10 96 Non-SMC Element family AT1G51130 41.379 1.23e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02227 K22825 - aip:107615159 162.54