Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02215 ATGTGGTTGAGACAGCATACTTGTGCTCTCCATAGGAGGAAGGCTGCAAGCCTTCCAGGCAATGCTACTTTCTTCTTGACCTATGTGGCTCTCAAATTTTTTGTTGGCTATGGTCTTGAGCTGTCCCGGTTAGTTCCTCTTATTTTATTCCATTTGAAGAAAAAGTATCTTTGCAAGACTGATGCGGAGGTGAAAGAGGCTTGGGCTCCTAGAGATCTTGGTTATGGGACTAGAGTTCCTAGTGACATGCTCATCGTCACAATCGTTTTCTGCTATTCTGTGATTGCTCCTCTGATAGTCCCATTTGGTGCTCTGTATTTTGGCCTTGGATGGCTTATACTAAGAAATCAGGAGAAGTTCCTCCAAGAGAGGATTAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGATTCTGTCACTGTCTCCCGTGAGAAGAACGAGAGGATTAAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCATTTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGTCTGTGCCCTTCATTTCAGTCGGAATCAGTTGCGCTCAATGAGATAA 585 0.4376 MWLRQHTCALHRRKAASLPGNATFFLTYVALKFFVGYGLELSRLVPLILFHLKKKYLCKTDAEVKEAWAPRDLGYGTRVPSDMLIVTIVFCYSVIAPLIVPFGALYFGLGWLILRNQEKFLQERIKVGGKAGALGDSVTVSREKNERIKIDEELLQEVVNMGFDRNHLVESLCNRIQNEVCALHFSRNQLRSMR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02215 194 Gene3D - 110 158 IPR038526 -
Aip10g02215 194 CDD UBA_SnRK1_plant 150 180 - -
Aip10g02215 194 PANTHER CSC1-LIKE PROTEIN ERD4 15 117 - -
Aip10g02215 194 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 149 189 IPR015940 -
Aip10g02215 194 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 15 117 IPR045122 GO:0005227
Aip10g02215 194 Pfam Ribosomal L22e protein family 115 153 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aip10g02215 194 Pfam Calcium-dependent channel, 7TM region, putative phosphate 15 120 IPR003864 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02215 Aip-Chr10 99237563 99240251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02215 118 146 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.207 2.34e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02215 K21989 - gmx:100797118 194.897