Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02210 ATGATGGAAACACTTCCTTCAGTACCAGGATCTCCTTTGTTGAACACACAAGTACTTAGGAGGTACAAATCGCCATGCACTTTTGTGGTTCCTAACTACTCTCTTAGATTCACTCGGATATGCTGCAAGAAGCTATCAGAAAATGGCATTGATGAGAAGCACAAACCCTCCACCAGCAATACCACTGCCTCTAAATCCAAGGACAGAATGGAAGATTACAATATTGCTATGAAGAGAATGATGAGGAATCCTTATGAGTATCACCACGATCTGGGTATGAATTACACACTTATAACTGACAATCTCATTGTGGGATCCCAACCACAGAAACCGGAAGACATCGATCACCTCAAGAAGGAAGAGGGTGTGACATACATTCTGAACTTGCAGCAGGATAAGGATGTAGAATATTGGGGAATAGACTTGAAGTCGATAACAAGGAGGTGTCATGAACTCGATGTTCGACATATGAGGAGGCCGGCAATTGACTTTGATCCAAACTCCTTGCGAAATGTTCTACCTAAAGCAGTCTCATCATTGGAATGGGCAATCTCAGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGCTGGACTTGGGAGAGCACCAGGGGTGGCAATAGCTTATCTGTTCTGGTTCTATGACATGAATGTGAGTTCTAAACTTCCACCTATCTTTGATTCAAGAAATGATTATCAAATTTGA 705 0.4199 MMETLPSVPGSPLLNTQVLRRYKSPCTFVVPNYSLRFTRICCKKLSENGIDEKHKPSTSNTTASKSKDRMEDYNIAMKRMMRNPYEYHHDLGMNYTLITDNLIVGSQPQKPEDIDHLKKEEGVTYILNLQQDKDVEYWGIDLKSITRRCHELDVRHMRRPAIDFDPNSLRNVLPKAVSSLEWAISEGKGRVYVHCTAGLGRAPGVAIAYLFWFYDMNVSSKLPPIFDSRNDYQI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02210 234 CDD DSP_laforin-like 93 217 IPR045204 GO:0019203|GO:0046838
Aip10g02210 234 ProSiteProfiles Dual specificity protein phosphatase domain profile. 94 234 IPR020422 GO:0006470|GO:0008138
Aip10g02210 234 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 170 229 IPR000387 GO:0016311|GO:0016791
Aip10g02210 234 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 18 219 - -
Aip10g02210 234 Gene3D Protein tyrosine phosphatase superfamily 87 219 IPR029021 -
Aip10g02210 234 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 18 219 - -
Aip10g02210 234 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 91 219 IPR029021 -
Aip10g02210 234 Pfam Dual specificity phosphatase, catalytic domain 115 220 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02210 Aip-Chr10 98881986 98883979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02210 23 229 Protein tyrosine phosphatase (PTP) family AT3G10940 65.888 2.50e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02210 - - gmx:100787079 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02210 10 98881986 98883979 Aip10g02210 10 98881986 98883979 ECH