Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02209 atggaagaagagggagaagggaaggtgggaaagggaAGGAAAAGGGAGTCCACCGCCGCTGCTCTCCGTCGTTCGGTCGTTGGTCCTCGCCGCTGCTCTTCgacgttgacgccagcagatccgggagggtggacgtcgtgcgccgctcaccgctcgccgtttctacttctcctcctcactcggtcgccggttgtcgctgctcctcaccagttgccgcTGCTTCCGATCGGGTTTGCTGTCTTCTTGGTCCACTTGGCAATCATTCCTATCACTGGAACTGGGATTAATCCAGTTAGGAGCCTTGGTGCTGCCATCATCTCCATCATCTTCAATAGAGACCATGCATGGAATGATCAGTGA 360 0.3028 MEEEGEGKVGKGRKRESTAAALRRSVVGPRRCSSTLTPADPGGWTSCAAHRSPFLLLLLTRSPVVAAPHQLPLLPIGFAVFLVHLAIIPITGTGINPVRSLGAAIISIIFNRDHAWNDQ 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02209 119 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 72 119 IPR034294 -
Aip10g02209 119 MobiDBLite consensus disorder prediction 1 20 - -
Aip10g02209 119 SUPERFAMILY Aquaporin-like 55 115 IPR023271 -
Aip10g02209 119 MobiDBLite consensus disorder prediction 1 26 - -
Aip10g02209 119 PANTHER AQUAPORIN PIP1-2-RELATED 72 119 - -
Aip10g02209 119 Pfam Major intrinsic protein 70 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip10g02209 119 Gene3D Glycerol uptake facilitator protein. 53 119 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02209 Aip-Chr10 98874159 98874595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02209 74 119 Major Intrinsic Protein MIP AT1G01620 80.435 5.90e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02209 K09872 - aip:107610721 127.102