Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02205 ATGACTTTCAAGCGCAGGAACGGAGGAAGAAACAAGCATGGCCGTGGCCACGTAAAATTCATTCGCTGCTCCAATTGCGGCAAGTGCTGTCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTCGAGATGTTCAGGAAGCCTGTGTCTATGAGCGTAATGATTCTTACCCGATCTGTATTTTTCTTCATCAAGATTTGAATTTTGAATGTTATTTAATTGTTCTTATGTTTGTAGAATACACTCTTCCGAAGCTGTATGTGAAGATGCAGTACTGTGTTTCGTGTGCTATTCACTCTCATGTTGTGAGGGTGCGTTCTCGCACTGATAGGAGGAACCGTGAGCCTCCGCAACGCTTTGCTAGACGCAGGGATGATGCACCAAGGCCCGGTCAACCTGGTCAAGCTCCTCGTCCTGCTGGAGTTGGAGCTGCTCCACGTGCTTGA 471 0.4735 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYERNDSYPICIFLHQDLNFECYLIVLMFVEYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPAGVGAAPRA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02205 156 Gene3D Ribosomal protein S26e 83 141 IPR038551 -
Aip10g02205 156 MobiDBLite consensus disorder prediction 115 156 - -
Aip10g02205 156 Pfam Ribosomal protein S26e 1 61 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aip10g02205 156 Pfam Ribosomal protein S26e 85 133 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aip10g02205 156 PANTHER 40S RIBOSOMAL PROTEIN S26 1 62 - -
Aip10g02205 156 PANTHER 40S RIBOSOMAL PROTEIN S26 86 154 - -
Aip10g02205 156 Gene3D Ribosomal protein S26e 1 72 IPR038551 -
Aip10g02205 156 MobiDBLite consensus disorder prediction 116 137 - -
Aip10g02205 156 PANTHER 40S RIBOSOMAL PROTEIN S26 1 62 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aip10g02205 156 ProSitePatterns Ribosomal protein S26e signature. 100 107 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aip10g02205 156 PANTHER 40S RIBOSOMAL PROTEIN S26 86 154 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02205 Aip-Chr10 98634361 98635289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02205 1 143 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 68.531 1.01e-63 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02205 K02976 - gmx:100784958 181.03