Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02178 ATGCCCTTCCTAGTTATAGTTCTATTGTTCCACCATCTAAGCCATTTACCATGCTTCTTTTGCCTCCTGATTCCGTGCACTCCTGGTAGAACACCGCTAAGTTGGCGAACTAGAATCCAAATTGCGATTGACGTAGCTAATGCATTGGAGTACCTTCATTTATATTGTGATCCTCCTTTGTGCCATAGAGACATTAAGTCTAGCAACATTTTTCTGGATGAAAATTTTGTTGCTAAGATAGCCGATTTTGGCCTTGCACAGGCATCAAAAAATGggattggatcaggagagtga 294 0.381 MPFLVIVLLFHHLSHLPCFFCLLIPCTPGRTPLSWRTRIQIAIDVANALEYLHLYCDPPLCHRDIKSSNIFLDENFVAKIADFGLAQASKNGIGSGE 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02178 97 PANTHER OS01G0750732 PROTEIN 28 92 - -
Aip10g02178 97 PANTHER BNAC06G02630D PROTEIN 28 92 - -
Aip10g02178 97 Gene3D Transferase(Phosphotransferase) domain 1 18 97 - -
Aip10g02178 97 Pfam Protein kinase domain 35 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02178 97 ProSitePatterns Serine/Threonine protein kinases active-site signature. 60 72 IPR008271 GO:0004672|GO:0006468
Aip10g02178 97 SUPERFAMILY Protein kinase-like (PK-like) 30 91 IPR011009 -
Aip10g02178 97 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02178 Aip-Chr10 97068736 97070042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02178 30 92 Receptor kinase-like Gene Family AT3G19300 79.365 1.16e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Aip10g02178 Pkinase 5.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02178 - - ahf:112715638 134.035