Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02168 ATGCCAATTGCTCTTACTAGAAGAGATCTACTTGGCTGTGCTGAAACTAGTAGTGGAAAAACTGCAGCTTTCACAATTCCTATGATACAGCATTACATGGCTCAATCTCCTATTTGGCGTGGTGATGGTCCTCTAGCATTAGTTTTGGCTCCTACTAGAGAACTTGCTCAACAAATAGAGAAAGAGGTTAAAGCTTTTAGCAGATTTCTTGAGTCATTGAAAACTACCATAGTTAGGTCTGAGCTAAGAGCAGGAGTTGAAATTGCTGTTGCAACCCCTGGAAAATTTATTGATCATTTACAACAAGGCAATACTTCCCTTTCTAGAATTTCTTTTTTGTTCTAG 345 0.3855 MPIALTRRDLLGCAETSSGKTAAFTIPMIQHYMAQSPIWRGDGPLALVLAPTRELAQQIEKEVKAFSRFLESLKTTIVRSELRAGVEIAVATPGKFIDHLQQGNTSLSRISFLF 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02168 114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 113 IPR027417 -
Aip10g02168 114 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 114 IPR014001 -
Aip10g02168 114 Pfam DEAD/DEAH box helicase 2 113 IPR011545 GO:0003676|GO:0005524
Aip10g02168 114 PANTHER ATP-DEPENDENT RNA HELICASE DBP2-LIKE 1 113 - -
Aip10g02168 114 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 113 - -
Aip10g02168 114 Gene3D - 1 114 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02168 Aip-Chr10 96453042 96454406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02168 9 102 Eukaryotic Initiation Factors Gene Family AT3G13920 38.095 2.77e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02168 K12823 - aip:110268207 216.083