Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02165 atGTCCCTTTTCTACCTTAACAGTAACAGTTACTTCTCCGGGACAATCCCTCAAGAACTCTTCTACAAGAATCTTGATGCATTGTTTCTCAACAACAATCAATTTGAAGGTGAAATTCCTCAGAATCTTGAAAATTCCCCTGCATCAGTGATAAATTTAGCCAACAACAAGTTGAGTGGGAACATCCGAGCAAGTTTTGGATTCATGGGTTCTAAATTGAAGGATATTCTGTTCCTGAATAACCAGTTAACTGGTTGCATCCCTGAAGGAGTAGGGTTATTCACTGAGATTTAA 294 0.3844 MSLFYLNSNSYFSGTIPQELFYKNLDALFLNNNQFEGEIPQNLENSPASVINLANNKLSGNIRASFGFMGSKLKDILFLNNQLTGCIPEGVGLFTEI 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02165 97 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 3 97 - -
Aip10g02165 97 PANTHER LRR/EXTENSIN 3 97 - -
Aip10g02165 97 Gene3D Ribonuclease Inhibitor 1 97 IPR032675 -
Aip10g02165 97 SUPERFAMILY L domain-like 5 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02165 Aip-Chr10 96351375 96351668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02165 12 97 Leucine-rich Repeat extension Gene Families AT5G25550 48.837 1.31e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02165 - - gmx:100790827 158.303