Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02163 ATGAATCGGAGGCAAAGCTATAATGAAATCCATGCAAATATCCTCCCAAACTCTAGAAGGAATAGGCAGCGGCTGCAACTATCCAGCTGGAAATCTCGTCTCTACTTTTGCTCGTTGACAAGTACCACAAGAGAGGACATATTCTCTCATTTGATGCTGCATCTTAGGCTAGTAAAATGTGGTGCAAATGCGTTCCACTATTTTAGCAATGCCCGCATGACCTCCtCGCCTCCTGTAACCCTAACCCCTCATTTTTTGTTTCTGAGTTCTCCATTCTCCATTCCTCTGCTCGGCTCCTTCATCCATACCGCCTCGCCACCTCCCTCCGTCAGTCCGAACCTCCCTCATCCGCAGCGCCTCGTTGAAGAGGCACAAAGCAGGGAAGCTCTAGTACAAAGATTGGCTGATAAGGCAAGCAAGAAGATAGCAGATGCTAAACTCGCGAAAGATTTTCAGGCAGTGTTAAAAGAATTTCAGAAGATAGCAGAGAGGGAAATTGCTTACACCCAATTTGTTCCACAAGCTGCTCCATCCAGCTATACAGCTAATGAAGTATATGCTAATTCTGGTAAGACTCTAGAACAGCGTGCCCTTCTTGTGGAATTCAGAAGGCAGGAGGTCTTGTTTTTAGATAATGAGATTGCCTTCAATGAGGCTATCATTGAAGAAAGAGAGCATGGCATTCAAGAAATTCAGCAGCAAATTGGTGAAGTAAATGAAATTTTTAAAGACCTTGCTGTGTTTGTGCATGAACGAGGAACTATGATTGGTTCAGTTGTTATTTAG 786 0.4402 MNRRQSYNEIHANILPNSRRNRQRLQLSSWKSRLYFCSLTSTTREDIFSHLMLHLRLVKCGANAFHYFSNARMTSSPPVTLTPHFLFLSSPFSIPLLGSFIHTASPPPSVSPNLPHPQRLVEEAQSREALVQRLADKASKKIADAKLAKDFQAVLKEFQKIAEREIAYTQFVPQAAPSSYTANEVYANSGKTLEQRALLVEFRRQEVLFLDNEIAFNEAIIEEREHGIQEIQQQIGEVNEIFKDLAVFVHERGTMIGSVVI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02163 261 PANTHER SYNTAXIN 137 258 IPR045242 -
Aip10g02163 261 CDD SNARE_Qa 221 259 - -
Aip10g02163 261 PANTHER SYNTAXIN OF PLANTS PROTEIN 137 258 - -
Aip10g02163 261 SUPERFAMILY t-snare proteins 138 258 IPR010989 GO:0016020|GO:0016192
Aip10g02163 261 Gene3D - 118 259 - -
Aip10g02163 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 218 261 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02163 Aip-Chr10 96329870 96334858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02163 139 259 SNARE and Associated Proteins AT5G46860 70.635 9.08e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02163 - K08488 sly:101259184 147.132