Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02159 ATGGCTTCTACTGGTTCATCTTCTTCCTCATGGTCTTCTTCAAATTGGGTCATGGAAAATGCTGCTGCCCCACATGTTCTTGCTGTTGATGATAACCTCATTGATCGCAAGCTCGTTGAGAAGCTCCTTAGGAACTCTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTCTTGGGCTTGACCGATAGTGAGCAGAACGCCATGAATGGAAGGTCCAAAGTTAATTTGGTTATCACAGACTATTGCATGCCAGGGATGACAGGCTATGAGCTACTTAAGAAAATCAAGGAATCATCTAGCATGAAGGAGGTTCCGGTAGTGATCATGTCATCGGAGAACATACCAACACGGATTAACCAGTGTTTGGAAGAAGGAGCTCAAATGTTCATGTTAAAGCCCCTCAAACAATCTGATGTGAAAAAACTGACATGTCAGTTAATGAATTAG 462 0.4307 MASTGSSSSSWSSSNWVMENAAAPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEFLGLTDSEQNAMNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIMSSENIPTRINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02159 153 SUPERFAMILY CheY-like 24 151 IPR011006 -
Aip10g02159 153 SMART REC_2 24 148 IPR001789 GO:0000160
Aip10g02159 153 CDD REC_typeA_ARR 26 147 - -
Aip10g02159 153 ProSiteProfiles Response regulatory domain profile. 25 152 IPR001789 GO:0000160
Aip10g02159 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 13 152 - -
Aip10g02159 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 152 IPR045279 GO:0009736
Aip10g02159 153 Pfam Response regulator receiver domain 26 146 IPR001789 GO:0000160
Aip10g02159 153 Gene3D - 20 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02159 Aip-Chr10 96135249 96137164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02159 5 153 Response Regulator Gene Family AT3G56380 70.199 1.39e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip10g02159 Response_reg 1.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02159 K14492 - gmx:100778707 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02159 10 96135249 96137164 Aip10g02159 10 96135249 96137164 ECH