Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02157 ATGAGTAGTATTGTAATCTGCGGTAGTGAGGGTAATATTGGTTTTTCAGAGAAGAGGGAGAGGCTTATGAATAAGCTTGTGGAGGGGCATAAACATGCCACTGAGCTGAAGCTTCTCCTTCAGAATCAGAATCAGAATCCTCCGGCCACTATTCATCACGGCGGCGGTTCATCAGCTGAGGCGCTATTAATAACCAAGATTCTCAGATCTTTCGCGGAGACTCTCTCCGTTCTAGATTCTCCTTCTTCTTCTGCTTCCTTCTTCCTTAACGAGAATAACAGTGGGTCCCAGCTTGTTATTGCTGCAAACTCCACCAATAATGATCTGAGGTCTGAAGAAGGTTCCAGTGAGAGTAGCAAAAGATTCTCTTCATCAGTCCCTAAGGATCGAAGAGGCACATACAAAAGAAGGAAAACGGAAGAGACATGGAGCAATGTATCTCCCACCACTGAGGATAATCTTGCCTGGAGAAAGTATGGACAGAAGGACATACTCAATTCTAAATTCCCCAGGAGTTATTATAGGTGCACTCGGAAGTATGATCAAGGTTGCAAAGCAACAAAACAAGTTCAAAGGATTCAAGATAATCCAGTTTTGTATCAAATTACGTACATTGGTCGTCATACTTGCAAAGAAACTCTCAAAGCTCCACAAATGACAGCATATCTTTTGAATCCACAAGACCATCATCAAACCCCACCAACAAATGCTATAATCAAACAAGAATATCCCAAACAAGAGGACACTCCGAGTGGTGAAATAATCATTGCAGAAAAATTGGATGCAAACCTTTGGTCTGAGTTGAAGGATATCGAGATAACCAACCCTCCTACTTATGCTAACTTTAGCGCATTTTCTTATCATTTTTGCACCACCGGGTTCCACTTTGATGATCATCATCATGGTGAAAGTCATATGCTATAA 924 0.4167 MSSIVICGSEGNIGFSEKRERLMNKLVEGHKHATELKLLLQNQNQNPPATIHHGGGSSAEALLITKILRSFAETLSVLDSPSSSASFFLNENNSGSQLVIAANSTNNDLRSEEGSSESSKRFSSSVPKDRRGTYKRRKTEETWSNVSPTTEDNLAWRKYGQKDILNSKFPRSYYRCTRKYDQGCKATKQVQRIQDNPVLYQITYIGRHTCKETLKAPQMTAYLLNPQDHHQTPPTNAIIKQEYPKQEDTPSGEIIIAEKLDANLWSELKDIEITNPPTYANFSAFSYHFCTTGFHFDDHHHGESHML 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02157 307 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 16 275 - -
Aip10g02157 307 SUPERFAMILY WRKY DNA-binding domain 148 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g02157 307 Gene3D WRKY domain 136 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g02157 307 SMART WRKY_cls 150 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g02157 307 MobiDBLite consensus disorder prediction 106 143 - -
Aip10g02157 307 ProSiteProfiles WRKY domain profile. 145 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g02157 307 MobiDBLite consensus disorder prediction 113 142 - -
Aip10g02157 307 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 275 IPR044810 GO:0003700
Aip10g02157 307 Pfam WRKY DNA -binding domain 151 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02157 Aip-Chr10 96066486 96068822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02157 18 242 WRKY Transcription Factor Family AT3G56400 42.308 1.11e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip10g02157 WRKY 3.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02157 - - adu:107470163 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01651 07 32091845 32097392 Aip10g02157 10 96066486 96068822 ECH
Aip10g02157 10 96066486 96068822 Aip10g02157 10 96066486 96068822 ECH