Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02155 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGACCATTAATGGATGTTCCTTGTGTTCAAGACAGAATTTTCTATTTCCCTCAGGGTCACATTGAATTGTTGCCAGAACCTACAGAACAAGAATTGAGGCAGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCGTCGAACAAGATATTTAAAGAACAAGATTTTTTTTCTTTTCTATCAGAAGGTtaa 339 0.3805 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYGGCAGPLMDVPCVQDRIFYFPQGHIELLPEPTEQELRQMKNQKSPKYDLPSNKIFKEQDFFSFLSEG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02155 112 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
Aip10g02155 112 CDD UBA_SnRK1_plant 5 34 - -
Aip10g02155 112 Pfam UBA/TS-N domain 5 34 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02155 Aip-Chr10 95853171 95854167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02155 45 96 B3 DNA Binding Superfamily AT5G62000 51.923 1.81e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02155 K14486 - ahf:114925841 218.009