Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02140 ATGCAGGAAATGTCACTGGACATTGGCATGGACGAGGCGGCCTCTGGAACAAGATATTTAGATGATGGTGGTGACCTGGGCAATGATGTACGTGACAGCGGTTTAGTACGGCCGGAGGAGAAGGCTCATCCCTCCAACTCTTCGCCCTGCACCCCGCCGCCCACAGCCACCGTAGTCTCTGCCACCACTGCAGCCACGCAGCCCCCGCATCAGCCCTCGCAGCTCCCCGCAACCCCCACAGCCTCGCAGCCCCTCAGCGGCACAGCCACCGCGCAGCCCCTACACAGACACAACCTCCACCGCCACCGTAGAAGATCCGTCGCCGTCGGATTCCGAGCTTCTTTTCGTTCCAGATCAGCGCTTTCTTTGTCAGATTCCCTTCGCGCAGCTGGTAGATCGCAAACCCTAACTTTTCTATTCGTATATCTGAAGTTGCAAGATCTTCAGAAAAGAGAAGGCGAGGTTGGAAGAAAGAAAGTTCTTCAATACACTCGATATGCGTCAGTTGGATTTGCAATTGTACAGGCAATTGGCCAAGTCCTCTTTTTACGTCCTTATGTGAATGACTTTAGTACCGACTGA 582 0.5412 MQEMSLDIGMDEAASGTRYLDDGGDLGNDVRDSGLVRPEEKAHPSNSSPCTPPPTATVVSATTAATQPPHQPSQLPATPTASQPLSGTATAQPLHRHNLHRHRRRSVAVGFRASFRSRSALSLSDSLRAAGRSQTLTFLFVYLKLQDLQKREGEVGRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02140 193 MobiDBLite consensus disorder prediction 24 39 - -
Aip10g02140 193 MobiDBLite consensus disorder prediction 15 103 - -
Aip10g02140 193 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 141 192 - -
Aip10g02140 193 SUPERFAMILY Preprotein translocase SecY subunit 139 186 IPR023201 -
Aip10g02140 193 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 141 192 IPR002208 GO:0015031|GO:0016020
Aip10g02140 193 MobiDBLite consensus disorder prediction 52 93 - -
Aip10g02140 193 Gene3D SecY subunit domain 133 192 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02140 Aip-Chr10 95246129 95247761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02140 141 193 Chloroplast and Mitochondria Gene Families AT2G18710 86.792 6.77e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02140 K10956 - adu:107457819 101.293