Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02138 ATGGCTCCAAGCAGACCACAAAAAGTAGTGCAAATGGTGGAACCTGTAGAAGATGATGGTGGTGGTGGTGGTGATGTTGATGATTTGAAGAAGAATGTTGTGAGAGCCTTGCCATTTTTCAAATTATTGAGCTATGCTGACGTAATAGATTGGATTCTGATGAGTTTGGGAATGGTGGGTTCGATTGTGCATGGAATGGCTCTTCCTGTTGGATACCTCTTGTTAGGAAAAGCTCTTAATGCTTTTGGGAACAATATTCATGACCAAGATGCCATGGTTAAAGCTCTTAAACAGGTTGTTCCGTACGTGTGGTACATGGCCATCGCCACATTCCCTGCTGGGATACTTGAGATTGGATGTTGGATGTATACAAGCGAAAGGCAGTTATCACGCCTAAGAATAGCATATCTAAAAGCAGTTCTTAGCCAAGAGATAGGAGCATTTGATACAGAACTAACAAGTGGAAAAGTCATTAGTGGAATAAGCAAACACATGAGTGTCATACAAGATGCCATTGGTGAGAAGTTGGGTCACTTTACCTCAAGCTGTTCAACATTCTTTTCCGGAATTGTGATTGCTGCCATATGCTGTTGGGAAGTGTCACTCTTGTGTTTAGTGGTTGTACCCCTTATTCTTATGATTGGAGCAACTTACACCAAGAAAATGAACACCATTTCAACGACCAAAATGTTTTTCCATTCTGAAGCTACAGCTATGATAGAGCAGACAATATCACACATAAAAACAGTATATGCTTTTGTGGGAGAGAGTTCTGCAATCAAATCCTTCAGAGAGAATATGGAGAAACAGTTCCAAATAAGCAAAGGGGAGGCGCTTGTGAAGGGAGTTGGAACAGGGATGTTTCAAACCGTAAGTTTCTGTTCCTGGGCTCTCATTGTATGGGTTGGAGCCGTTGTCGTGACAGCCGGTAGAGCGAAGGGAGGAAACATTATAGCTGCAGTGATGAGCATCCTCTTTGGTGCCATATCCATCACTTACGCGGCACCAGACATGCAAATATTCAACCAGGCAAAAGCAGCAGGATATGAAGTTTTCCAAGTGATACAAAGAAAGCCTTTAATAAGCAACGAAGCACAAGGGAGGAAGGTTACCGAGATCACAGGCGACATTGAGCTGAGGGATGTATACTTTACCTACCCATCTCGACCGGAGAAACCTATCCTTCAAGGACTATCCTTGTCAATTCCAGCAGGAAGGACAGTAGCTCTAGTTGGTAGCAGTGGTTGCGGAAAAAGCACTGTTATTTCCCTGGTTAACAGATTCTATGACCCTGCTAGAGGAGAAGTTTTTATTGATGGTCACAATATCAAGGATCTTGATCTGAAGTTCCTTCGGAGTAATATAGGGCTCGTTTCCCAAGAACCGTCACTGTTTGCAGGCACCATCAAGGATAACTTGAAAGTGGGGAAAATGGATGCAGATGATCAAGAGATACAGAAGGCAGCTGAAATGTCAAATGCACACACTTTTGTATCACAGCTGCCGAATCAGTACTTAACAGAGGTAGGACAAAGGGGAGTTCAATTATCAGGAGGCCAGAAACAGAGAATTGCAATAGCAAGAGCCATTCTTAAGAATCCTCCCATCCTTTTGCTTGATGAGGCAACTAGCGCCCTTGACACCGAGTCAGAAAAGCTGGTTCAAGAAGCACTTGAAACAGCCATGCAGGGAAGGACTGTCATCTTGATTGCACACAGACTCTCAACAGTTGTAAACGCAGATATGATTGCTGTAGTAGAGAACGGACAAGTTGTAGAAACAGGCACACACCAGAATTTGCTCGACAAAAGCGATTTCTATAGGGCATTATATAGCATGCAGAACCTTGAAGCAGCTCCTGAATCCAGCACCACAATTTCCAAAAGTAAGAGTACCCACCAAGGAGATTCTACTGATGAAGCTAAACTCTCGGAGAAGCAAAAAGAGACTCAAATAAATCCCATGGAGGATTCTGAGCTAAAGGGACAGGAGACAAGAAAAAGAAATATATTTTTCAGAATCTGGTTTGGTCTGAAACCGAGGGAGCTGGCAAAGATTGCTTTTGGCTCAGCCGCAGCAGCTTTCTCTGGTGTGTCGAAGCCAGTTTTCGGGTACTGCATCATCACTATTGGAGTTGCATACTTCGATCCCGATGCAAAAAGGAAGGTTGGCTATTATTCAGCCTTCTTCTCTGCAATAGGGTTGCTTTCATTACTCAGTAACACAATCCAGCATTACTTCTATGGAGTAGTCGGAGAAAAGGCCATGGAGAATTTCAGACATGCTCTATATAAAGGTGTGCTCCGTAACGAAGTAGGCTGGTTTGATAGATCTGATAACACGGTTGGTTCATTAACTTCGCGAATCATCAGTGACACTGCCCTGGTCAAAATCATAATTGCTGATCGGATGGCTGTGATTGTGCAATGCATTTCCTCCATATTGATAGCAACAGGTGTGAGCATGTATGTCGACTGGAGAATGGCTTTGGTAGCTTGGGCTGTGATGCCTTGCCACTTCATAGGCGGTCTCATTCAAGCAAAGTCTGCCAAAGGCTTTTCAGGTGACTATGCTGCTTCCCATTCTGAGCTTGTTGCTCTTGCATCTGAGTCTGCAGCCAACATAAGGACTATAGCGTCATTTTGCCATGAAGAACATGTAATCATGAAAGCAAAGACATCTCAGGAAATTCCAATGAGAAAGTACAGGAATGAAAGCATCAAATACGGGATCGTTCAAGGCTTCTCCCTTTGCTTGTGGAACATTGCACATGCTGTTGCTCTGTGGTATACAACAATTCTAGTTGAAAGACGTCAAGCCACCTTTAAAAATGGAATACGAGCATACCAAATCTTTTCTCTCACTGTTCCCTCTATCACAGAATTATATACACTGATCCCAACTGTCATCTCAGCTATCAATGTACTAACCCCAGCATTCCAAACGCTTGATCGGAAAACTGAAATCGAACCAGATACACAGGATGATTCCCAACCGGAGAGGATCCTAGGAGAAGTTGAATTTGAACATGTAAAATTCAACTACCCTTCAAGACCTGCAGTCACTGTTCTGGACAACTTCAGTTTACAAATTGAAGCTGGATCAAAGGTGGCTTTTGTAGGACCGAGTGGTGCGGGAAAATCCTCTGTTTTGGCCCTTATACTAAGATTTTATGATCCAAGGGCAGGAAAGGTATCAATTGATGGGAGAGATATACGGGGATATAATCTAAGATGGCTAAGGACTCAAATAGGGCTAGTACAACAAGAACCACTTCTTTTTAACTGCTCTATAAGAGACAACATTTGCTATGGACACAATGGGGCTTCTGAAAGTGAAATAGTGGAGGTTGCCAGAGAAGCAAACATACATGAATTTGTAAGTAACCTACCAGATGGATATAACACTGTTGTTGGGGAAAAAGGGTGCCAGCTTTCAGGAGGTCAAAAGCAAAGAATAGCCATTGCCAGAACCTTGCTAAAGAAGCCTGCAATTTTACTCCTAGATGAAGCAACAAGTGCTCTTGATGCTGAGTCGGAAAGAACTATTGTGAGCGCTTTAAAAGCAATAAATCTCAAGGAGGACAGTGGCTTGTGTTCAAGGACTACCCAGATTACGGTAGCTCACAGGCTTTCCACAGTAATAAATTCGGATACCATAATTGTCATGGACAAGGGTAAGATTGTAGAGATGGGATCCCACTCAACCCTAATAACAACTGGAGAAGGACTCTATTCGAGGTTATTCAAGCTACAGAGCTTTGATGAATCCTCGTAA 3777 0.4302 MAPSRPQKVVQMVEPVEDDGGGGGDVDDLKKNVVRALPFFKLLSYADVIDWILMSLGMVGSIVHGMALPVGYLLLGKALNAFGNNIHDQDAMVKALKQVVPYVWYMAIATFPAGILEIGCWMYTSERQLSRLRIAYLKAVLSQEIGAFDTELTSGKVISGISKHMSVIQDAIGEKLGHFTSSCSTFFSGIVIAAICCWEVSLLCLVVVPLILMIGATYTKKMNTISTTKMFFHSEATAMIEQTISHIKTVYAFVGESSAIKSFRENMEKQFQISKGEALVKGVGTGMFQTVSFCSWALIVWVGAVVVTAGRAKGGNIIAAVMSILFGAISITYAAPDMQIFNQAKAAGYEVFQVIQRKPLISNEAQGRKVTEITGDIELRDVYFTYPSRPEKPILQGLSLSIPAGRTVALVGSSGCGKSTVISLVNRFYDPARGEVFIDGHNIKDLDLKFLRSNIGLVSQEPSLFAGTIKDNLKVGKMDADDQEIQKAAEMSNAHTFVSQLPNQYLTEVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDTESEKLVQEALETAMQGRTVILIAHRLSTVVNADMIAVVENGQVVETGTHQNLLDKSDFYRALYSMQNLEAAPESSTTISKSKSTHQGDSTDEAKLSEKQKETQINPMEDSELKGQETRKRNIFFRIWFGLKPRELAKIAFGSAAAAFSGVSKPVFGYCIITIGVAYFDPDAKRKVGYYSAFFSAIGLLSLLSNTIQHYFYGVVGEKAMENFRHALYKGVLRNEVGWFDRSDNTVGSLTSRIISDTALVKIIIADRMAVIVQCISSILIATGVSMYVDWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYAASHSELVALASESAANIRTIASFCHEEHVIMKAKTSQEIPMRKYRNESIKYGIVQGFSLCLWNIAHAVALWYTTILVERRQATFKNGIRAYQIFSLTVPSITELYTLIPTVISAINVLTPAFQTLDRKTEIEPDTQDDSQPERILGEVEFEHVKFNYPSRPAVTVLDNFSLQIEAGSKVAFVGPSGAGKSSVLALILRFYDPRAGKVSIDGRDIRGYNLRWLRTQIGLVQQEPLLFNCSIRDNICYGHNGASESEIVEVAREANIHEFVSNLPDGYNTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTIVSALKAINLKEDSGLCSRTTQITVAHRLSTVINSDTIIVMDKGKIVEMGSHSTLITTGEGLYSRLFKLQSFDESS 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02138 1258 SUPERFAMILY ABC transporter transmembrane region 674 991 IPR036640 GO:0005524|GO:0016021
Aip10g02138 1258 Pfam ABC transporter 1024 1173 IPR003439 GO:0005524
Aip10g02138 1258 Pfam ABC transporter 395 544 IPR003439 GO:0005524
Aip10g02138 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 377 613 IPR003439 GO:0005524
Aip10g02138 1258 CDD ABC_6TM_Pgp_ABCB1_D1_like 54 351 - -
Aip10g02138 1258 Pfam ABC transporter transmembrane region 56 328 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g02138 1258 Pfam ABC transporter transmembrane region 691 945 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g02138 1258 SUPERFAMILY ABC transporter transmembrane region 41 359 IPR036640 GO:0005524|GO:0016021
Aip10g02138 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 614 IPR027417 -
Aip10g02138 1258 Gene3D ABC transporter type 1, transmembrane domain 41 968 IPR036640 GO:0005524|GO:0016021
Aip10g02138 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 56 343 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g02138 1258 ProSitePatterns ABC transporters family signature. 516 530 IPR017871 GO:0005524
Aip10g02138 1258 CDD ABC_6TM_Pgp_ABCB1_D2_like 701 989 - -
Aip10g02138 1258 Gene3D - 996 1257 IPR027417 -
Aip10g02138 1258 SMART AAA_5 404 596 IPR003593 -
Aip10g02138 1258 SMART AAA_5 1033 1227 IPR003593 -
Aip10g02138 1258 CDD ABC_MTABC3_MDL1_MDL2 377 614 - -
Aip10g02138 1258 Gene3D - 367 615 IPR027417 -
Aip10g02138 1258 MobiDBLite consensus disorder prediction 633 661 - -
Aip10g02138 1258 ProSitePatterns ABC transporters family signature. 1145 1159 IPR017871 GO:0005524
Aip10g02138 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1006 1250 IPR003439 GO:0005524
Aip10g02138 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 687 971 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g02138 1258 PANTHER ABC TRANSPORTER B FAMILY 31 1254 - -
Aip10g02138 1258 MobiDBLite consensus disorder prediction 621 661 - -
Aip10g02138 1258 CDD ABC_MTABC3_MDL1_MDL2 1006 1252 - -
Aip10g02138 1258 PANTHER BRACHYTIC2 31 1254 - -
Aip10g02138 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1252 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02138 Aip-Chr10 95171949 95182601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02138 16 1257 Calmodulin-binding Proteins AT2G36910 40.764 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02138 K05658 - zju:107414909 1805.42