Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02129 ATGAATAGAGATCCTGAAAATTGGGGACCAGATGCAAATGAATTTAAACCAGAAAGGTTCAGTGAGGGTCTCTCTAAAGCTTGCAAGTATCCACAAGCATATGTACCATTTGGATTGGGTCCTCGATTGTGTCTAGGCAAAAATTTTGCAATAGTTCAGTTAAAGGTTGTGTTGGCACTCATCATCTCCAACGCCGTCGTTGTCTCCGTCTTCTGCAAGTCTCACCACGTTCTTGCCGCTGCTGATAGTGGTGACGATGGAAGTTTTGGGATGGACGATTTGGTTGAGTGTGTGACGCCGGTGACTCCTTCCGACGGTGAATTGGTGGGGTTTGGGCGTGCCGTTTCTGACTGCGGCCTCACTGCTTCAATTTATGATGTCATGGTTATTCCATCCCTGAGGAGAATGGGAATTGGAAGGGTGATACTTAAAAGAATTGTGAGAATGCTTATAAATAGAGGTGTTTATGACATAGCAGCCCTTTGCACCGAGAACGAGAGGTTGTTTTTTAAGGCATGTGGATTTGGGGGTGACATTTTAGGCTCTACAACCATGATGTACACCAGAACTGCTTCATCTACTGCCGAGGAAGAACTAACCTTTACACGTGCGGGTAGAAAGCTATTGTTGATTCCCCCTCTTAAGTCTTAA 651 0.4516 MNRDPENWGPDANEFKPERFSEGLSKACKYPQAYVPFGLGPRLCLGKNFAIVQLKVVLALIISNAVVVSVFCKSHHVLAAADSGDDGSFGMDDLVECVTPVTPSDGELVGFGRAVSDCGLTASIYDVMVIPSLRRMGIGRVILKRIVRMLINRGVYDIAALCTENERLFFKACGFGGDILGSTTMMYTRTASSTAEEELTFTRAGRKLLLIPPLKS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02129 216 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 54 202 IPR000182 GO:0016407
Aip10g02129 216 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 104 175 IPR016181 -
Aip10g02129 216 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 37 46 IPR017972 GO:0005506|GO:0016705
Aip10g02129 216 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 53 213 - -
Aip10g02129 216 Pfam Cytochrome P450 1 64 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02129 216 Gene3D Cytochrome P450 1 74 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02129 216 Gene3D - 75 183 - -
Aip10g02129 216 Pfam Acetyltransferase (GNAT) family 100 175 IPR000182 GO:0016407
Aip10g02129 216 PRINTS E-class P450 group IV signature 44 62 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02129 216 PRINTS E-class P450 group IV signature 3 21 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02129 216 PRINTS E-class P450 group IV signature 28 44 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02129 216 SUPERFAMILY Cytochrome P450 1 64 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g02129 216 CDD NAT_SF 105 155 - -
Aip10g02129 216 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 53 213 IPR039143 GO:0004343|GO:0006048
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02129 Aip-Chr10 94636637 94640511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02129 1 64 Cytochrome P450 AT5G24900 70.312 1.31e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip10g02129 Acetyltransf_1 6.4e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02129 - - aip:107620813 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02129 10 94636637 94640511 Aip10g02129 10 94636637 94640511 ECH