Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02115 ATGAAGTTGCAGTTATCCATCGTTGTGCTTGTCCTTCTAAGCTTCATAGTTTCACTCTTTGAATTGATTGTAGCTGATTTAAACTCTGACAAACAAGCTCTCTTAGAGTTTGCTTCAGCCGTTCCACATGCACCAAGGCTAAACTGGAATGAGTCTACTTCAGTTTGCAACTCATGGATTGGTGTGACTTGTAACTCGAACAGAACCCGAGTCACCGGCATCCATCTCCCGGGAATTGGACTAACCGGTTCAATTCCAGAGAACACTTTAGGAAAACTAGACACTCTTAGAGTCCTTAGCCTTCATTCAAATGGCCTTAAAGGAAATCTTCCTTCTGACATAGTTTCCATTCCTTCACTCCAATTTGCACTGCTTCACCACAATAATTTCTCAGGTCCAATTCCTTCCTCTGTCTCCCCTAAACTCGTGGCATTCGATGTTTCCTTTAACTCCTTCTCTGGAAGAATTCCACCAGCATTTCAGAATCTGAGAAGACTCACCTGGTTGTATTTACAACACAACAACATTTCTGGAACTATCCCTGAATTCAACCTTCCAAAGCTTAAACAATTGAATTTGAGCTATAATAACTTGAATGGAACAATTCCAAATTCTGTTAAGACATTTCCTTACACTTCTTTCGTAGGTAACTCGCGCTTATGCGGACCGCCTCTCAACAATTGCTCATCGATATCCCCTTTTCCATCTCCTTCCCCTGAGTATCAACCATCCTCTCCATCAACTACACAAGATCAAAAGGATCATAAGAATAACTTTGGCCTAGCTACTATACTTGCTCTTGTCATTGGAGGCATTGCATTTCTCTCTCTGCTAGTTTTAGTGTTCTTTATATGCTGTCTGAAGCGAAAACCGAAAGACAGTACTAAAAAAAGCGGTGGCATACTCAAAGGGAAGGGATCTTGTGCTGGAAAGACTGAGATTTCCAAGAGTTTTGGGAGTGGAGTTCAAGAGGCCGAAAAGAACAAGTTATTCTTCTTTGAAGGTTCATCTTATAGCTTTGATCTTGAGGACTTACTGAAGGCTTCGGCCGAAGTTCTTGGTAAAGGGAGTTATGGAACAGCATACAAGGCTGTTTTGGAGGAAGGAACAACTGTGGTAGTTAAGCGGTTGAAGGAAGTTGTTGTTGGAAAGAAGGAGTTTGAGCAGCAGATGGAAATTGTTGGGAGGATTGGACGCCACCCGAATGTCATGCCGCTTCGCGCTTATTACTATTCCAAAGATGAGAAGCTTCTAGTTTATAACTTCATGCTTGGTGGAAGCTTGTTTCACTTGTTGCATGGAAACAAGGGTGCAACAAGAACTCCATTAGACTGGGATTCAAGGGTGAAGATTTCACTTGGAGCAGCCAAGGGAATTGCATTCATTCACTCTGAATGCGGTCCAAAGTTCACACATGGCAACATCAAATCCACCAATGTTCTCATATCCCAAGAACTTGATGCCTGCATATCCGATATTGGCTTGCCTCCACTGATGAACACTCCGGCAACCATGTCAAGAGCCAATGGCTACCGTGCTCCAGAAGTAATTGATGCGAAGAAGATCACACAAAAATCTGATGTGTACAGCTTTGGTGTGCTGCTTCTTGAAATGTTGACAGGGAAGACACCAATGAGGCATCCGGGGCATGAAGACATCGTCGATCTTCCAAGGTGGGTGAAGTCTGTTGTTAGGGAAGAATGGACAGCTGAAGTTTTCGATGAGGAGCTTCTAAGAGGCCAATATGTTGAAGAGGAGATGGTGCAGATGCTTCAGATTGCATTGGCTTGTGTTGCTAAGGCACCTGATATGAGGCCTAGAATGGATGAAGCTGTTAGGATGATAGAGGAAATAAAGCACCCCGACTCAAAGAACCGGCCGTCCTCTGAGTCGGAGTCTAATGCGCAAACACCATGA 1917 0.4356 MKLQLSIVVLVLLSFIVSLFELIVADLNSDKQALLEFASAVPHAPRLNWNESTSVCNSWIGVTCNSNRTRVTGIHLPGIGLTGSIPENTLGKLDTLRVLSLHSNGLKGNLPSDIVSIPSLQFALLHHNNFSGPIPSSVSPKLVAFDVSFNSFSGRIPPAFQNLRRLTWLYLQHNNISGTIPEFNLPKLKQLNLSYNNLNGTIPNSVKTFPYTSFVGNSRLCGPPLNNCSSISPFPSPSPEYQPSSPSTTQDQKDHKNNFGLATILALVIGGIAFLSLLVLVFFICCLKRKPKDSTKKSGGILKGKGSCAGKTEISKSFGSGVQEAEKNKLFFFEGSSYSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQQMEIVGRIGRHPNVMPLRAYYYSKDEKLLVYNFMLGGSLFHLLHGNKGATRTPLDWDSRVKISLGAAKGIAFIHSECGPKFTHGNIKSTNVLISQELDACISDIGLPPLMNTPATMSRANGYRAPEVIDAKKITQKSDVYSFGVLLLEMLTGKTPMRHPGHEDIVDLPRWVKSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKAPDMRPRMDEAVRMIEEIKHPDSKNRPSSESESNAQTP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02115 638 Pfam Leucine Rich repeats (2 copies) 165 202 IPR025875 -
Aip10g02115 638 PANTHER OS05G0588300 PROTEIN 4 636 - -
Aip10g02115 638 Gene3D Phosphorylase Kinase; domain 1 312 422 - -
Aip10g02115 638 Pfam Protein kinase domain 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02115 638 Gene3D Ribonuclease Inhibitor 142 230 IPR032675 -
Aip10g02115 638 CDD STKc_IRAK 353 618 - -
Aip10g02115 638 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
Aip10g02115 638 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g02115 638 MobiDBLite consensus disorder prediction 235 254 - -
Aip10g02115 638 SUPERFAMILY L domain-like 40 225 - -
Aip10g02115 638 Gene3D Transferase(Phosphotransferase) domain 1 423 637 - -
Aip10g02115 638 PANTHER RECEPTOR-LIKE KINASE 4 636 - -
Aip10g02115 638 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Aip10g02115 638 SUPERFAMILY Protein kinase-like (PK-like) 351 618 IPR011009 -
Aip10g02115 638 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Aip10g02115 638 MobiDBLite consensus disorder prediction 616 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02115 Aip-Chr10 94019917 94022773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02115 5 633 Receptor kinase-like Gene Family AT5G58300 58.954 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip10g02115 Pkinase 3.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02115 - - aprc:113868460 1015.76