Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02111 ACTCTGTTGCTCATCCCCAACTCTGTTACTCATCGTCGACACTTGCACTATCTCCTCTGCCGGCGCTCCCTCCGTCGTCTCCCTTAACCCGTCTCTGCTGGCGCTCGCATTCCCTGCGCTCACTACTCACGGTGTCGGTCAGCCAACGGAGGTCGCCTTTCCTTCCTCCGTGCCGCCATTCTCTGTCCTCCACCCTCGTCATGTTGCTCAATCTTCCACTACCTTCGAAGTCCTCACTGCATGCATATGGCTCAATGCACGTTTTGACTGTGCCGTCGCCGCCGCTAGAAGAGCACTCAATCGCAACAAAGGCAACGACTGGCCTTCTGCCTCCGGTGCTCACCGAGCCCGCTATCTCCGCGCCATCGCTGCCATGGTCGTCGAGAGAAAGGATCACCTCGCTAAGCTTGAATCCCTTGATTGCGGAAAACCACTCGATGAAGCTGCCTGGGACATGGATGATGTTGCTGGTTGCTTCGAGTTTTATGCTGACCTTGCCAAGAACCTCGACGCTAAGCAGAAGGCATCCGTTTCTCTTCCCATGGAAACTTTCAAGAGTTATGTCCTCAATGAATCCATTGGTGTTGTTGGATTAATCACCCCATGGAGGAGACTTAAAGGTACCTACACTGACTTATCTGTATTGGTGAAAGAGATATACAATTTTTCCCAAGATGATCTAATGACAAAAGATATATTCATCTTGGATTGTCACTCTGAAATCTTTGTCTGGGTTGGCCAGGGAGTTGACCCCAAGAGCAGAATGCAGTCTCTAACCATTGGTGAGAAATCGCTCATTCTTGCTCTCTCCAATCCAACATCTCAATCTGAGTGCACTGCTGAAGAAGCTTATACATGGAGCAAGGGTCAAGCAATCTTTGCTAGTGGTAGCCCATTTGATCCTTATGAATATGAAGGAAAAGTCTTTGTTCCTGGACAGGCCAACAATGCTTACATATTCCCTGGTTTTGGCTTCGGTTTGATCATCTCCAGTGCAATCCGCGTCCGCGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTACACAAGTGTCACAGGAGAACTATGATAAAGGACTGATTTACCCTCCATTCTCAAATATCAGAAAGATATCAGCACATATTGCTGCTAACGTGGCAGCAAGGCATATGAACTTGGTCTTGTTTCTCATCTACCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACAGAAACTACTATTGAGATTTTTGAACCATATTATATCATGTTTTGTTTAGTTTAG 1288 0.4767 LCCSSPTLLLIVDTCTISSAGAPSVVSLNPSLLALAFPALTTHGVGQPTEVAFPSSVPPFSVLHPRHVAQSSTTFEVLTACIWLNARFDCAVAAARRALNRNKGNDWPSASGAHRARYLRAIAAMVVERKDHLAKLESLDCGKPLDEAAWDMDDVAGCFEFYADLAKNLDAKQKASVSLPMETFKSYVLNESIGVVGLITPWRRLKGTYTDLSVLVKEIYNFSQDDLMTKDIFILDCHSEIFVWVGQGVDPKSRMQSLTIGEKSLILALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPYEYEGKVFVPGQANNAYIFPGFGFGLIISSAIRVRDEMLLAASEALATQVSQENYDKGLIYPPFSNIRKISAHIAANVAARHMNLVLFLIYLDLRILSNMQKVACTAQATETTIEIFEPYYIMFCLV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02111 428 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 208 261 IPR036180 -
Aip10g02111 428 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 261 385 IPR036291 -
Aip10g02111 428 PANTHER MALIC ENZYME-RELATED 258 388 - -
Aip10g02111 428 Gene3D - 249 404 - -
Aip10g02111 428 SUPERFAMILY ALDH-like 87 203 IPR016161 GO:0016491
Aip10g02111 428 SMART Malic_M_2 192 384 IPR012302 GO:0051287
Aip10g02111 428 Pfam Gelsolin repeat 220 254 IPR007123 -
Aip10g02111 428 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 205 IPR016162 GO:0016491
Aip10g02111 428 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 258 388 - -
Aip10g02111 428 Pfam Aldehyde dehydrogenase family 87 202 IPR015590 GO:0016491
Aip10g02111 428 Pfam Malic enzyme, NAD binding domain 262 381 IPR012302 GO:0051287
Aip10g02111 428 SMART VILL_6 203 292 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02111 Aip-Chr10 93561332 93565900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02111 89 202 Aldehyde Dehydrogenase Gene Family AT1G74920 79.825 1.48e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02111 K00029 - aip:107633154 246.514