Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02094 ATGGGAGCCGTTGTTGACTGTTATCCGCCGCACGCCGGCGAGGTTGCAGTTTTGTCTCTCAATTCGCTTCCCTTAGGTTTCCGATTTCGACCTTCCGACGAGGAGCTTGTTGACTATTATCTGAGACAGAAAATCAACGGAAATGGAGAAGAAGTCTGGGTTATTCGAGAAATCGATGTTTGCAAATGGGAGCCTTGGGACTTGCCAGATTTGTCGGTGATAAGAAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACCGGAAGTATCCAAATGGTCACCGGTTGAACCGAGCAACGAATCATGGGTACTGGAAGGCCACAGGAAAAGATCGTAAGATCAAGTCAGGTTCCACCTTGATTGGGATGAAGAAGACTCTGGTGTTCTACACAGGTCGTGCTCCCAAAGGGAAGAGAACCAATTGGGTCATGCATGAGTACCGCCCCACCCTCAAGGAGCTTGATGGCACCAACCCTGGACAGAATGCGTATGTACTCTGCCGGTTATTCAAGAAACAAGATGAGAGTCTTGAGGTTTCAAACTGTGATGAGGTGGAACAAACAGATTCGGCTCCCATGGCGGCCAATTACTCCCCTGAAGAAATACAGTCTGATCAGGCTCTGGCTGAAGTATCGCCGTCTCAAGTTACAGATGAGAAGCACCAGGGTGTTATCCCTGAGAACTCTGAGGAAGCGGTTTCCAACGTTATAACCTCTGCTGATTGCCATAGTGACGGATATGATGCTTGTGAAAGGCGAAATCAAGCTTTTGAACTACCTGCTGAGGACATTCCGCCGTTGAATTGGGACATATTCAATGACCCCGAAGACAAGATATTTGATGACAAATTATTCTCCCCAGTCCATAGCCATATTCCACCAGAATTTTACTACCAAGCAAACAATGAGACAAATATTGCAGACATCTTAAATTCTGTCAATTGGGATGAGATCTCCTATGAGGATCCCTATAGTCAAGCACAGAACAACTTTTTTAATAATGTTAAGCAAAGTGTATCAGGTAGCGAACCAGATGCAGGGCTGACCAATATGACATGTGTACACCCGACGAATGTTGTTTATCCCGAGGAGGCAATTCACAGAAAGGTTGCTTTGGCAACAACTCCGCAATTTTGCAGCACCTTCACGTCTGACTTCAGTGCTGATGAGCAGAAGAGCAGTGTCGCGTTAATTCAAAACAATTCCCAGATGGCTTCTTTTCCGGATGCCAGAACAGTCCAAGTGTATAACGTATTCAATGATTATGAGCAGCCGAGAAACCTTAATACCTATGTTAGTGGTGATACTGGAATCAAGATAAGGACTCGACAAGTGCGAAATGAACAACCAGCAATGATCTTTACAGATCAAGGTAATGCAGCAAGGAGAATCCGATTGTTAAAGCAGTGTGCAGATGTCTCAAACAAGATGGCAGATGATGGGAGTCCTAAACAAGAGCATGATTCAAAACCAATAATTGCAGGGAACAAAAACAAAACTTTCAAAAGTCATACTGCAGATAAGCATGATACTGCTAATGATCTGAATGAACGCCAGGAGAAAACTGAATCAACTGATAAAAGAAACATGATATCTAAACTTGCTAAAGGAGGTTCTTCCATGTTGGGGTTGAAGGGATTATTGCGCAGAAGGCTTAGTTACATATCAAAGGCTTCCTCCAATTTCAAAATGTGGTCTTGTGTTGTTGTGGCTTCTGCCTTTGTATTGGTCTCGTTTGTGTTCTTTGCTAACATATGGGGATATATTAACTTATGA 1779 0.4401 MGAVVDCYPPHAGEVAVLSLNSLPLGFRFRPSDEELVDYYLRQKINGNGEEVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCDEVEQTDSAPMAANYSPEEIQSDQALAEVSPSQVTDEKHQGVIPENSEEAVSNVITSADCHSDGYDACERRNQAFELPAEDIPPLNWDIFNDPEDKIFDDKLFSPVHSHIPPEFYYQANNETNIADILNSVNWDEISYEDPYSQAQNNFFNNVKQSVSGSEPDAGLTNMTCVHPTNVVYPEEAIHRKVALATTPQFCSTFTSDFSADEQKSSVALIQNNSQMASFPDARTVQVYNVFNDYEQPRNLNTYVSGDTGIKIRTRQVRNEQPAMIFTDQGNAARRIRLLKQCADVSNKMADDGSPKQEHDSKPIIAGNKNKTFKSHTADKHDTANDLNERQEKTESTDKRNMISKLAKGGSSMLGLKGLLRRRLSYISKASSNFKMWSCVVVASAFVLVSFVFFANIWGYINL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02094 592 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 18 454 - -
Aip10g02094 592 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Aip10g02094 592 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Aip10g02094 592 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Aip10g02094 592 Gene3D NAC domain 32 177 IPR036093 GO:0003677|GO:0006355
Aip10g02094 592 MobiDBLite consensus disorder prediction 502 528 - -
Aip10g02094 592 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 454 - -
Aip10g02094 592 MobiDBLite consensus disorder prediction 480 494 - -
Aip10g02094 592 MobiDBLite consensus disorder prediction 476 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02094 Aip-Chr10 92829761 92833142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02094 15 470 NAC Transcription Factor Family AT4G35580 40.558 1.60e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip10g02094 NAM 5.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02094 - - gmx:100777071 659.448