Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02072 ATGGCCTATACTTATACTGCCACTTCCATCATATATACTCACTCAACACCCCCCAAAAGAACAAAAAACCACTTAAACCCCTCTATTATTCCCAAACCAATAAAAAAAAGAAATATGGGTTCAAGCGGTGAGACACAGATAACGCCAACTGTGGTGTCCGATGAGGAGGCGAACCTCTTTGGGATGCAGCTAGCAAGTGCCTCTGTTCTCCCAATGGTTCTGAAGGCAGCAATTGAGCTTGATCTGTTGGAGATCATTGCCAAAGCTGGCCCCGGAGTTCACCTTTCTCCGGCTGACATTGCGGCGAAGCTTCCAACCACCAACCCCGATGCTCCGGTGATGCTGGACCGCATGTTGAGGCTCTTGGCTTGCTACAACATCTTCACCCACTCCCTCCGTACCCTTCCTGATGGCAAGGTTGAGAGGCTCTATGGTCTTGCACCTGTTGCTAAGTTCTTGGTCAAGAATGAAGATGGCGTCTCTCTTTCTGCTCTTAACCTCATGAATCAGGACAAAGTTCTCATGGAAAGCTGGTACTACTTGAAAGATACAGTGCTTGAAGGAGGGATTCCATTTAACAAGGCTTATGGAATGACAGCATTTGAATACCATGGCACAGATCCAAGGTTCAACAAGGTTTTCAACAAAGGGATGAACGATCATACTACAATAACAATGAAGAAAATCCTTGAGATCTACACAGGCTTTGAAGGTCTTAAATCTCTAGTTGATGTTGGAGGTGGTGTTGGAGCCGTAATGAACATGATTGTCACCAAGTATCCCCATATAAAGGGCATTAATTTTGATTTGCCCCATGTTATTGAAGATGCACCATCTTATCCGGGAGTGGAGCATGTTGGTGGCGACATGTTTGTCAGTGTTCCAAAAGCAGATGCTGTTTTTATGAAGTGGATTTGCCATGACTGGAGTGATGATCACTGCATAAAGTTTTTGAAGAACTGCTATGATGCACTCCCCTACAACGGGAAGGTGATTGTGGCCGAATGCATTCTTCCGGTGGCGCCGGATTCTAGCTTGGCCACGAAGGGCGTGGTCCACATCGACGTGATCATGTTGGCTCACAACCCAGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCCCTTGCCAAGGCTGCTGGATTCCAAGGTTTCCGAGTCCTCTGCTGCGCTTTCAACACCTATATCATGGAATTCCTCAAGAAGCCTTAA 1212 0.4653 MAYTYTATSIIYTHSTPPKRTKNHLNPSIIPKPIKKRNMGSSGETQITPTVVSDEEANLFGMQLASASVLPMVLKAAIELDLLEIIAKAGPGVHLSPADIAAKLPTTNPDAPVMLDRMLRLLACYNIFTHSLRTLPDGKVERLYGLAPVAKFLVKNEDGVSLSALNLMNQDKVLMESWYYLKDTVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMNDHTTITMKKILEIYTGFEGLKSLVDVGGGVGAVMNMIVTKYPHIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDDHCIKFLKNCYDALPYNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKAAGFQGFRVLCCAFNTYIMEFLKKP 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02072 403 Gene3D - 39 153 IPR036388 -
Aip10g02072 403 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 158 399 IPR029063 -
Aip10g02072 403 MobiDBLite consensus disorder prediction 16 45 - -
Aip10g02072 403 PANTHER O-METHYLTRANSFERASE 39 402 IPR016461 GO:0008168
Aip10g02072 403 SUPERFAMILY "Winged helix" DNA-binding domain 54 157 IPR036390 -
Aip10g02072 403 PIRSF O-mtase 39 401 IPR016461 GO:0008168
Aip10g02072 403 PANTHER BNAA03G48770D PROTEIN 39 402 - -
Aip10g02072 403 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 62 401 IPR016461 GO:0008168
Aip10g02072 403 Pfam O-methyltransferase domain 178 383 IPR001077 GO:0008171
Aip10g02072 403 Pfam Dimerisation domain 72 123 IPR012967 GO:0046983
Aip10g02072 403 Gene3D Vaccinia Virus protein VP39 154 401 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02072 Aip-Chr10 91075813 91081215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02072 39 402 Monolignol Biosynthesis Gene Families AT5G54160 74.451 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02072 K13066 - gmx:100780100 681.019