Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02050 ATGCCTGCGACGCCATCCTTGCCGAGGTCCAAGAGCAGGTTTCCATCCTCAACTCCACTTTCTCATGGAAGGAGTCAGATCGAGCCGCCGCCAAGCGCCACTCACGCGCTCGCCGATCTTGCAAAAAACGGTAAATCCTTCGTTCCTCTTCCTCGATCTCCTAGCGCGTTGCTCCCTTCGTTTCGATTTTTGGCAAATTCGGTCGTGCATCACCTCCAAGCTTCTCTCGTGACGGAAGAAGACCTCGTTCAGAAGCTGTTGCTGTTTGAGCATGAGGTTGAGAAAGTGAGTGCTTTTGCACCTGGACTTCTTGCCGCTGTAGTTGCCGCGTTGAAAGCTTCTGAATCGAGCCACTATTTCAATTTGACAGAAGCTGTTTCTGCTTATGAGAGCTTGACCCTTCGAGGTTATGATGTTGTTGCTGTTGTTTTGGGAGATCACAGCCTTCTAAAAGAGGGTCGAATAATGTCTTATATGCGGAACAAGCCTTATTGGAGGTGTTACTTTCCAATTACTCAAGCAATAATCTATGTTGTTGATTCAAGTGATACCGATAGGCTTGTGATAGCTAAGGAAGAGTTCCATGCTATTCTGGAGGCTGACTCTGAAGTTCACATACACTGGAAAGGTGCTACTGAGATTGTCCTAGCCTGTTGTCCACGGTACATTGATGCAAATGACCAATTGATAGACATGGATGAGGAAAAGGATCCTTGTCGACCTGGAGTCAAAGATTCAGTGGAGCTTTGCCAAAAATATGGGGTTAAGCTTACAGTAAATGTAGCAGCTCTTGTTATAAATGTTGTTGCTGTTGTTTCCTCTGGTGATGTCCCACTGAATGCAGTGCAGATTTTGTGGGTGAATCTTATCATGGATACTTTGGGAGCACTAGCATTGGCAACTGAACCACCAACTGACCATCTTATGGATTGGGCCCGAAGGTCGGAACTTCAGTTTCTCTAA 963 0.4631 MPATPSLPRSKSRFPSSTPLSHGRSQIEPPPSATHALADLAKNGKSFVPLPRSPSALLPSFRFLANSVVHHLQASLVTEEDLVQKLLLFEHEVEKVSAFAPGLLAAVVAALKASESSHYFNLTEAVSAYESLTLRGYDVVAVVLGDHSLLKEGRIMSYMRNKPYWRCYFPITQAIIYVVDSSDTDRLVIAKEEFHAILEADSEVHIHWKGATEIVLACCPRYIDANDQLIDMDEEKDPCRPGVKDSVELCQKYGVKLTVNVAALVINVVAVVSSGDVPLNAVQILWVNLIMDTLGALALATEPPTDHLMDWARRSELQFL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02050 320 Pfam ADP-ribosylation factor family 162 202 IPR006689 GO:0003924|GO:0005525
Aip10g02050 320 Gene3D - 254 318 - -
Aip10g02050 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 201 IPR027417 -
Aip10g02050 320 MobiDBLite consensus disorder prediction 9 28 - -
Aip10g02050 320 MobiDBLite consensus disorder prediction 1 31 - -
Aip10g02050 320 Gene3D - 110 217 IPR027417 -
Aip10g02050 320 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 201 235 IPR023299 GO:0000166
Aip10g02050 320 SUPERFAMILY Calcium ATPase, transmembrane domain M 256 310 IPR023298 -
Aip10g02050 320 PANTHER CATION TRANSPORTING ATPASE 256 311 - -
Aip10g02050 320 PANTHER CALCIUM-TRANSPORTING ATPASE 195 235 - -
Aip10g02050 320 PANTHER CALCIUM-TRANSPORTING ATPASE 256 311 - -
Aip10g02050 320 PANTHER CATION TRANSPORTING ATPASE 195 235 - -
Aip10g02050 320 Pfam Cation transporting ATPase, C-terminus 277 315 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02050 Aip-Chr10 88620251 88624388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02050 256 312 Primary Pumps ATPases AT4G29900 85.965 3.28e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02050 K01537 - ahf:112750285 87.8113