Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02043 ATGTCCACAAACAAGCATGATGTTAAGAATGATTCAGATGATGATTTGGGTGATGATTTCGATTATGAACTGACTCCACAAGATGATGTTGATTCGTTGAATTTTACTAGCAAGAGTGAACAAGATTGTGGTGTAAAAAGAATAACAAATTTAATGGTAGAGGATATTTGGAACTTGGAGTTTAGGACAGAGGATGATGCTTGCCAATTTTATAATGCTTATGCTTGTTGGCATGGCTTCGTAATGAGGAAGGATGACGTCGTGAGGGCTAAGGAAGGTAAAATCATTTGCAGAAAACTTGTCTGCAATAAGGAGGGTTGGAGGAACATGAGGTATATTGATTTGGATAATAGATCAAGGGAGGCAAGGTCACTCACGCGAACCAAGTGTCCAGCTCGGCTCAAGGTAAAGGTTGACTACGGCTGTGGTAGATTGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATTTGACGCCCCCCCAATTTGCGCATCTTGTTCCAGCCAATTGTCGTCTCACTGTTACTGATAAAGTTCAAGTGAAAAATCTTCATAATTTTGGTGTCAAGACGTGCCATATTATGGGATATATTGCGTTCCAAAAGGGTGGATATCATCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGGTATTATAGATCAAAAGTAAAGAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGAGAAGGCAAACAACGATCCGCTGTTCTTTGAAAAGTATACGTTCACCAGTGACCAAAGGCTGGAGCATATATTTTGGGCAAATGGGCAATTAATTGTCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACGTACAAGAAGAATAAATACAACAAACCTTTGGTCATTTTCTCTGGATGCAATAATCATGGGCAGACTGTTATTTTCGGCTCCGGTCTACTTTCAGACGAGACGACAGACACGTATAAGTGGTTCTTGAAAACGTTTGCCAAAGCGATGGGTGGGAAGCGTCCTAAAGCAATAATAACCGATGGAGATCTTGCAATGCAAGATGCAATCAAGTTCTTCCCGATGCACCCATCGGTTATGCGGGTGGCATCTTCAGAGAAATGCATGTGA 1128 0.4122 MSTNKHDVKNDSDDDLGDDFDYELTPQDDVDSLNFTSKSEQDCGVKRITNLMVEDIWNLEFRTEDDACQFYNAYACWHGFVMRKDDVVRAKEGKIICRKLVCNKEGWRNMRYIDLDNRSREARSLTRTKCPARLKVKVDYGCGRLKVSCFVESHNHDLTPPQFAHLVPANCRLTVTDKVQVKNLHNFGVKTCHIMGYIAFQKGGYHHAGFTRKDLYNHIDRYYRSKVKNGDANAAINYLIEKANNDPLFFEKYTFTSDQRLEHIFWANGQLIVDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNNHGQTVIFGSGLLSDETTDTYKWFLKTFAKAMGGKRPKAIITDGDLAMQDAIKFFPMHPSVMRVASSEKCM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02043 375 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 358 IPR031052 GO:0006355
Aip10g02043 375 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Aip10g02043 375 Pfam MULE transposase domain 281 357 IPR018289 -
Aip10g02043 375 MobiDBLite consensus disorder prediction 1 21 - -
Aip10g02043 375 PANTHER OS02G0262500 PROTEIN 55 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02043 Aip-Chr10 87867578 87868705 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g02043 FAR1 1.4e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02043 - - adu:107460934 630.172