Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02017 ATGATGGCGGCATCTTTAGGGAGGTTCCCTTTCACAAGTGCTCAATGGAGGGAACTTGAAAGACAAGCTATGATTTACAAGTACATGATGGCTTCTATTCCTGTTCCTCCAGAGCTACTCCTTATGCCTATCGCTGCTGCTTCTCGCTCATCTCCTTTGGAAGGAGGAGGAGGAGGAGGTGGTGGTTTCAATCTGAGGCTTTCAAGCAGTAACAATAATGATGCAGAACCAAATAGGTGCAGGAGAACAGATGGTAAGAAATGGAGATGTTCAAGAGAGGTTGCTCCTAATCACAAGTACTGTGAGCGTCATATGCATAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAACTTCACAACAACAACAATAACAATGGACACAATCTACTTAAGAGGGCTCGCCATGATTCTCATCCTTATGCTGCCTCTAGTGCTGCTGTTACTGTCGCATTCTCTAACCACTCTACAAGAAAAGATCCTTCTTCACCTCATTTTCTTGCTTCTGCTACCACCAATCATCATTCATACCTTGAATCTGCTTCTTCCCTTTCTCTTCACAACTTCGGTGCTGGTTCTGTTCCATCAAGTAGGGAGCCCAGGGGGTTGGATTGGATGCTGAATGGAGATCCTATTTCGCTTGGAACATCAGATTCAGAATGGAACACTCTGATGAACAACAACAAAGTTGGATTCAATGCTATGAGTTCCTGCAGCAACACTGAGCCTCAATATATGAACTCATTCCCAGTCTATAGCCCTGGATTGGATCAGCAACACAATAAGCGCTCTCCAACTTTCCTTAACCCTGTTCTGGTTCCTATGGAAACTCTCCAATCTGATAAACCAAGGGTTTTCATCGATGCTTGGTCGAACGCGGCAACGGATCAAGAAACTAATGATGCCGACAACAAGAACTCTGTTTCATCAATTGGGAAACTGTCCCTCTCTTCTCTTGATTTATCAATGGGAGGTGGATATATGCATGAAGAAGTGGGGTTAGGCCTAATGGAAGAGCCAGAGCCGGAAGAGAACAACACAAGCAATGGCACTAAATCTGGCTTCTCGAATTGGCCCACACCACCACCTTGGGTAGCTTCAACCACCACACCTGGTGGTCCACTAGCTGAAGTTCTAATGCCGAGTACAGTCACTTCCACCAATGATGGTGCCGCCGCCACTTCCAATTCGAATCTTTCGTCTCCGGCCACGACAATGGTGTCATCTCCATCTGGGGTATTGCACAAGACACTTGCTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTCCATCTTCAGGGGCAAATTCTGAAATTGCCTTGCTCAGGTTCAATCAGAAGTAG 1347 0.4625 MMAASLGRFPFTSAQWRELERQAMIYKYMMASIPVPPELLLMPIAAASRSSPLEGGGGGGGGFNLRLSSSNNNDAEPNRCRRTDGKKWRCSREVAPNHKYCERHMHRGRPRSRKPVELHNNNNNNGHNLLKRARHDSHPYAASSAAVTVAFSNHSTRKDPSSPHFLASATTNHHSYLESASSLSLHNFGAGSVPSSREPRGLDWMLNGDPISLGTSDSEWNTLMNNNKVGFNAMSSCSNTEPQYMNSFPVYSPGLDQQHNKRSPTFLNPVLVPMETLQSDKPRVFIDAWSNAATDQETNDADNKNSVSSIGKLSLSSLDLSMGGGYMHEEVGLGLMEEPEPEENNTSNGTKSGFSNWPTPPPWVASTTTPGGPLAEVLMPSTVTSTNDGAAATSNSNLSSPATTMVSSPSGVLHKTLASLSDSSSNSSPRVPSSGANSEIALLRFNQK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02017 448 MobiDBLite consensus disorder prediction 338 373 - -
Aip10g02017 448 PANTHER - 2 437 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aip10g02017 448 MobiDBLite consensus disorder prediction 341 362 - -
Aip10g02017 448 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Aip10g02017 448 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip10g02017 448 PANTHER GROWTH-REGULATING FACTOR 7 2 437 - -
Aip10g02017 448 MobiDBLite consensus disorder prediction 385 448 - -
Aip10g02017 448 Pfam QLQ 10 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip10g02017 448 Pfam WRC 75 117 IPR014977 -
Aip10g02017 448 MobiDBLite consensus disorder prediction 52 82 - -
Aip10g02017 448 SMART QLQ_2 9 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02017 Aip-Chr10 86783149 86786044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02017 276 426 GRF Transcription Factor Family AT5G53660 37.580 1.69e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aip10g02017 WRC 3.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02017 - - adu:107469817 816.609