Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01998 ATGAGAAAAGGATACACAATTGTGGCATCATTTAAAAAGTGTAGCCTTAGTCACCACTCACCACATGGCTGCGCCACTCACCAGTCACTAGCTCACCGCTCACAAGCTCACACTCTCATCCTCACTCACACACACACAAAAGAGGGAAAAACCAGAAAAGGGGAGAACGGGAAGAAGAAGAGAAGAAGAGAGGAGAGGGGAAGGAAAGAGAGGACGACACCGGCTAGGGCTCTGCCGTGCGGACCATCATCGTTGCGTGCGCTGACCGTCACCTCGCATCGCCATCTTGTGCACTCACCGTCGCCGCTCAGCATCATCGTCGCATGTGCTCACTGTCGCTGCTCAGCATTATCGTCGTCGCTCAGCATCGTCATCGCCGCTCACCTGAGAAGGATCCAAAATGAGGTCTGTGCCCTTCATTCTCTCCTTTCGTGTCTTCTTGATTGTCTCTTATTATTATCTATATATTTCTGGGTATATTGGGTATCTTTAACCAAACCTGAGAGAAGTCAAGTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTCTTGCTTATATGCACCAGCGGGGATACTTCCACCGTGATCTGAAGCCTGAGAACTTGCTGGTTACCAAGGATATCATAAAAATTGCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGCGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTTGA 768 0.4792 MRKGYTIVASFKKCSLSHHSPHGCATHQSLAHRSQAHTLILTHTHTKEGKTRKGENGKKKRRREERGRKERTTPARALPCGPSSLRALTVTSHRHLVHSPSPLSIIVACAHCRCSALSSSLSIVIAAHLRRIQNEVCALHSLLSCLLDCLLLLSIYFWVYWVSLTKPERSQVTKKNEPPKYCEAKGSLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRRYRAPEVLLQSYLYSSKV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01998 255 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 187 255 - -
Aip10g01998 255 SUPERFAMILY Protein kinase-like (PK-like) 187 255 IPR011009 -
Aip10g01998 255 Pfam Protein kinase domain 187 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01998 255 Gene3D Transferase(Phosphotransferase) domain 1 187 254 - -
Aip10g01998 255 MobiDBLite consensus disorder prediction 42 79 - -
Aip10g01998 255 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 187 255 - -
Aip10g01998 255 MobiDBLite consensus disorder prediction 43 73 - -
Aip10g01998 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Aip10g01998 255 ProSiteProfiles Protein kinase domain profile. 45 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01998 255 SMART serkin_6 45 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01998 Aip-Chr10 84361457 84363627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01998 187 255 MAP Kinase Gene Family AT4G11330 52.857 3.69e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip10g01998 Pkinase 8.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01998 K08829 - qsu:112020153 136.346