Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01994 ATGGATACCCAAGTAGCGCCATTTTTCCTTCTCCTCCTCCTTCTCTTCACCATTTTGGTATCTGGTACTGAATCAGCATCGTGCCCGTTTAATCTCAACTACGTTGACACCTTATCATGGGACACATCAACATGCAGAGACCCAATCGACACACAACACTGCTGCCAAACCCTGTTGAGTCTTATCGGCATTGGACTCTCTCAGCACCTCAAACAAACCTCCCAGTTCCAACTCCAGGATAACAATACTTCCGCATCTTGCTTATCTGAATTCAGATCCAAGCTTTCACCCTTGTTGCTGAACACATCTATGGTGTCCACATGCTTCCAGAACTCGGATTTCGTCTCGAATTCTTCGAGTTGTGCCGGGATTGAGAACATCCAAGATTGGAGGCAGAAGGTGGGGTTAATCTCCCCACTGGACACTTCTTGCAGTGGCGACATGAATGGCCAAACGCAGTGCAGCATTTGCACGGACGCGGGATTCAAGGTCACTGCAGACTTGAACCAAAAGGACCCAAATTCGACCAAATGCTTCTACTTCACAATCTTGTATGCTGCTGGTGTTGTTAACCAGTTTGGTCCAAGCAATTTGGGCACGGCTTCTTGCATTCTGGGCTTGCCGCTGTCCACGAAGAAAGGGTCGTGGAACAAGGAACAAGTTTTGAAATTGGTTTTTGGGATATTGGGTGCTCTTGGTGGTGTTATTCTCACTTCGGTTCTGATTGTTTTGTTTAGAAAGTGGGATAGGAGGAGGAGGGAGAACCTTTATCACAGGTCAATCGAAAACAGCGTTAGGAACAGCGTTTTGCCCAATGCGGGGGCGAAATGGTTTCATATTTCAGAGCTTGAACGAGCCACTAACAAGTTTTCACAGAGGAATATGATTGGTCAAGGTGGTGATGGGGTAGTGTACAAGGGGACTCTTTCAGACGGCACTTTGGTTGCGGTTAAAGAGATTCTGAACTTGGAAAGCAAAGGGGATGAGGAGTTTTGCTATGAGGTAGATATCATAAGCAAAATAAAGCATAGAAATCTTCTTGCTCTTCGGGGTTGTTGCGTCACGAGCGATAACTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTATATGCCTAATGACAGCCTCAGTTACCAATTGTCCATTGCTGGTGCTAATAGGCTAACATGGCCACAAAGGAAGAGCATAATTCTTGATGTGGCTAAGGGGCTTGCTTATTTGCATTACGAAATCAAACCCCCGATTTATCACCGCGACATTAAAGCGACCAACATACTTCTTGATAGCAAGATGAAAGCAAAAGTGGCGGATTTTGGATTAGCAAAACAGGGCAGTGAAGGCCAGTCTCACCTCACAACAAGGGTGGCTGGCACATACGGTTATCTGGCGCCAGAGTACGCGCTATACGGCCAACTAACAGAGAAGAGTGATGTGTATAGTTTTGGAATTGTGATCTTAGAGATCATGAGTGGGAGGAAGGTACTAGACACGACGAATTCGATTTCAAACGTGGTCTTGATCACGGATTGGGCGTGGACGCTCGCGAAATCAGGTCGGACGGAGGAGATTCTTGATGAGTCAATAAGGGAAGAAGGGCCAGAGAAGATCATGGAAAGGTTTGTTCTTGTTGGGATTCTTTGTGGTCATGCAATGGTTGCGCTTAGGCCTACCATTGCTGAGGCAATGAAGATGTTGGAGGGTGATATTGACATTCCTGAGTTGCCAGACAGGCCGGTACCACTTGGTCATGAGTCGTTTCGATCTTCTCTTCTCTTTGGATTGCAAAGAAGCGGAAGGTCCATGCCATATCTCTCATCTTATGAAACAAATATGACTACGAGCACAATGTAG 1851 0.4608 MDTQVAPFFLLLLLLFTILVSGTESASCPFNLNYVDTLSWDTSTCRDPIDTQHCCQTLLSLIGIGLSQHLKQTSQFQLQDNNTSASCLSEFRSKLSPLLLNTSMVSTCFQNSDFVSNSSSCAGIENIQDWRQKVGLISPLDTSCSGDMNGQTQCSICTDAGFKVTADLNQKDPNSTKCFYFTILYAAGVVNQFGPSNLGTASCILGLPLSTKKGSWNKEQVLKLVFGILGALGGVILTSVLIVLFRKWDRRRRENLYHRSIENSVRNSVLPNAGAKWFHISELERATNKFSQRNMIGQGGDGVVYKGTLSDGTLVAVKEILNLESKGDEEFCYEVDIISKIKHRNLLALRGCCVTSDNLKGKRRFLVYDYMPNDSLSYQLSIAGANRLTWPQRKSIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVADFGLAKQGSEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTTNSISNVVLITDWAWTLAKSGRTEEILDESIREEGPEKIMERFVLVGILCGHAMVALRPTIAEAMKMLEGDIDIPELPDRPVPLGHESFRSSLLFGLQRSGRSMPYLSSYETNMTTSTM 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01994 616 Pfam Protein kinase domain 292 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01994 616 ProSiteProfiles Protein kinase domain profile. 290 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01994 616 Gene3D Transferase(Phosphotransferase) domain 1 371 571 - -
Aip10g01994 616 Pfam SPARK 24 179 IPR043891 -
Aip10g01994 616 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 10 591 - -
Aip10g01994 616 Gene3D Phosphorylase Kinase; domain 1 252 370 - -
Aip10g01994 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Aip10g01994 616 PANTHER OS01G0253100 PROTEIN 10 591 IPR045271 GO:0004714|GO:0006468
Aip10g01994 616 SUPERFAMILY Protein kinase-like (PK-like) 275 582 IPR011009 -
Aip10g01994 616 SMART serkin_6 290 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01994 Aip-Chr10 82434382 82436678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01994 17 587 Receptor kinase-like Gene Family AT1G11050 52.551 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip10g01994 Pkinase 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01994 - - ccaj:109788171 950.273