Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01987 ATGGAAGGATTTGATGGTGACTCCCTTGGCGCTCACCGTCTGTCACGGAGAGAGCGCCGGAGCTTCTCCCGAAAGAGAAGGATTCAGAAGGCGGCGAAGGTGGAAACGAACAAGGACAACAAGGGAAGGCGTCAGAGGGAGAAGAACGAGCTAGCGAATCGCCTTGCGAAACTGAGTCTCAGACAATCACTTTGCTCCGCCGTTCCGATCTCATCACCTTCCTTCGGTTGCTTCATTCAGGACATGCCTAATGGATACTCTAAGGTGACTTGGGTTGAACATGTAGAGATCGAAGACAAAACTTCGGTTCATCATCTTTTCCGGAATCTTGTTTATAATGGAATGGCATTTGGAGCTCAGAGATGGCTTGCCGTGCTGCAGAGGATGTGTGAAAAAGAGGAGCATGATGAGGCTTGCACAAAGAAAACAGTTTTAAGATCTTGA 444 0.4865 MEGFDGDSLGAHRLSRRERRSFSRKRRIQKAAKVETNKDNKGRRQREKNELANRLAKLSLRQSLCSAVPISSPSFGCFIQDMPNGYSKVTWVEHVEIEDKTSVHHLFRNLVYNGMAFGAQRWLAVLQRMCEKEEHDEACTKKTVLRS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01987 147 MobiDBLite consensus disorder prediction 28 49 - -
Aip10g01987 147 MobiDBLite consensus disorder prediction 1 16 - -
Aip10g01987 147 Pfam START domain 76 132 IPR002913 GO:0008289
Aip10g01987 147 MobiDBLite consensus disorder prediction 1 49 - -
Aip10g01987 147 ProSiteProfiles START domain profile. 76 135 IPR002913 GO:0008289
Aip10g01987 147 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 73 133 IPR042160 -
Aip10g01987 147 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG12-RELATED 73 133 - -
Aip10g01987 147 SUPERFAMILY Bet v1-like 74 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01987 Aip-Chr10 81303646 81304974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01987 76 132 Homeobox Transcription Factor Family AT1G73360 66.667 4.80e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01987 K09338 - gmx:100809075 107.457