Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01986 ATGGATAATGGTAGCAACACGTTGGACTTTTGTAATCTCAAAGTAGTATCCGCCTTGGGACGTGGTGCCAAGGGCTTGGTTTTCTTGGCGAAAATAAATGAGGGGCAAAATGAGAAGCAATGGCTGGCATTGAAGGTGGTCTCAAAAGCTTTTGTTCGGATGAGAAATAGCAGCCATTGCAAGAGGGTCTCGTTCGAACAACAAATATTGCGTCGTTTTAATCACCCTCTCTTGCCACGGTTGCGAGGGGTCTTAGAAACCGAGGAGCTGTTAGGGTTTGCCATTGACTATTGCCACGGCGGAAACTTACATTCTTTAAGAAGGAAACAATCGGAGAAGACGTTTCCTATTGATGCCATAAGGTTTTATGCTGTGGAATTGGTCCTCGTATTGGACTACTTGCATAGTATTGGAGTAGTGTACAGAGATTTGAAGCCAGAGAACATATTGATTCAAGAAACAGGTCACATAATGCTCGTGGATTTTGATCTCTCCAAGAAGTTGAACCCAAAGTCACCGCAATTGTTGAGTGGCATATCATCACCAAGTTCCGACTCAGCATTACTGGTTGACCGAAGAAAGCGATTGTTACCAGGTTGCTACTGTTGTCACTCGGGTATCATGCCTCTTGACTCAGACAGTCAACTCGGCACTAACTCACCAGCACGGAGCGAGTCCGACTCAGTGGAGAAATCCAACTCATTTGTCGGAACAGAGGATTACGTTGCACCAGAGATTATAACTGGGGAAGGACACAACTTCGGTGTTGATTGGTGGTCCCTCGGTGTTGTTTTGTACGAGATGTCGTATGGAACGACACCGTTTAAGGGCGTAAACAGAAAAGAGACATTTCAACGGATCTTGATGAAACAACCAGATCTATCAGGTGAAAACACACCGTTGAGGGACCTGATCAAGAAGTTACTTGAAAAGCATCCAGACCGTAGGATTGAGGTACATGAAATCAAGTGCCATGATTTCTTTAAGGGTGTGAACTGGAACTCAGTTTTGCAAATTGCTCGTCCACCATATATTCCTCAAAATGACATTGAGGACAAAGCAGGGTTTTCTAGAAAAGACGTAGAGTCGTTTGTTCGTAAAATATTTTTCAAGAATGACAATAAGGAAGAGAAGCCTAAAGAGGTGGAGAAAAAGAAAATTGATGGTGCAAATCAGAATAAGGTTTATAACAAAAATCAAAATACGGTGTGGGTTGACAAATTGACTGACAATCCAACTCAAAACGAAGACTTCTTAATGTTTTGA 1266 0.4273 MDNGSNTLDFCNLKVVSALGRGAKGLVFLAKINEGQNEKQWLALKVVSKAFVRMRNSSHCKRVSFEQQILRRFNHPLLPRLRGVLETEELLGFAIDYCHGGNLHSLRRKQSEKTFPIDAIRFYAVELVLVLDYLHSIGVVYRDLKPENILIQETGHIMLVDFDLSKKLNPKSPQLLSGISSPSSDSALLVDRRKRLLPGCYCCHSGIMPLDSDSQLGTNSPARSESDSVEKSNSFVGTEDYVAPEIITGEGHNFGVDWWSLGVVLYEMSYGTTPFKGVNRKETFQRILMKQPDLSGENTPLRDLIKKLLEKHPDRRIEVHEIKCHDFFKGVNWNSVLQIARPPYIPQNDIEDKAGFSRKDVESFVRKIFFKNDNKEEKPKEVEKKKIDGANQNKVYNKNQNTVWVDKLTDNPTQNEDFLMF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01986 421 Pfam Protein kinase domain 230 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01986 421 Pfam Protein kinase domain 15 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01986 421 SMART serkin_6 13 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01986 421 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 6 394 - -
Aip10g01986 421 ProSiteProfiles AGC-kinase C-terminal domain profile. 329 421 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip10g01986 421 Gene3D Phosphorylase Kinase; domain 1 14 101 - -
Aip10g01986 421 Gene3D Transferase(Phosphotransferase) domain 1 226 364 - -
Aip10g01986 421 SUPERFAMILY Protein kinase-like (PK-like) 11 357 IPR011009 -
Aip10g01986 421 MobiDBLite consensus disorder prediction 214 233 - -
Aip10g01986 421 ProSiteProfiles Protein kinase domain profile. 13 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01986 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Aip10g01986 421 Gene3D Transferase(Phosphotransferase) domain 1 102 171 - -
Aip10g01986 421 PANTHER FLIPPASE KINASE 1-RELATED 6 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01986 Aip-Chr10 81106200 81108565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01986 5 421 AGC Kinase Gene Family AT3G25250 51.636 2.61e-139 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip10g01986 Pkinase 3.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01986 K20714 - gmx:100785773 500.745