Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01985 ATGCCTAATATTGAATTTTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTTCTTATATGCACCAGTGGGGATACTTCCACCGTTATCTGAAGCCTGCAAATGGAGATTTATACTATGGTCTATTCTGA 279 0.3692 MPNIEFSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLSYMHQWGYFHRYLKPANGDLYYGLF 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01985 92 Gene3D Phosphorylase Kinase; domain 1 5 33 - -
Aip10g01985 92 Pfam Protein kinase domain 8 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01985 92 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01985 92 SUPERFAMILY Protein kinase-like (PK-like) 8 84 IPR011009 -
Aip10g01985 92 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 7 84 - -
Aip10g01985 92 Gene3D Transferase(Phosphotransferase) domain 1 34 85 - -
Aip10g01985 92 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01985 Aip-Chr10 80254297 80255458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01985 8 84 Core Cell Cycle Gene Families AT1G66750 35.065 1.39e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip10g01985 Pkinase 6.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01985 K08829 - ahf:112785869 165.622