Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01979 ATGGAGGAGCAAAATGGTATGGGGAAGTTGTTGAAAAAGTTGAAGCCATATCTTGCGATGGTTTCGCTTCAGTTTGGGTACTCTGGGATGTATGTCATCACCATGGTTTCTTTCAAACATGGAATGAGTCATTGGGTACTCTCTGTTTACCGTCATGTTATTGCCACACTCATCATGCTTCCCTTTGCTTTTGTCCTTGAAAGGAAAATAAGGCCAAAGATGACTCTGCCAATCTTCCTGAGGTTAGCTGCGCTTGGTTTCCTTGAGCCAGTTCTTGACCAAAATTTGTACAACATGGGTATGAAGAGCACCTCAACAACGTTTGCATCGGCCATTGTTAATGTCCTCCCAGCCATTACTTTTGTTATGGCTCTCATTTTCAGGTTAGAGACAGTGAATTTGAGAAAGATTCACAGCGTAGCGAAGGTAATTGGAACAATGGTGACAGTGTCAGGAGCCATGATCATGACCCTGTACAAAGGACCAGCACTTGAGTTCATAAAGGGACATGGAGGAGGAGCCATCCACCATGATAGTCGTAACGGTTCAAGAACTGAGCCTTCTGAACAAAACTGGGTGATTGGCACACTCATGCTCATTGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATCTTGCAATCTTTGACTTTGAAGATGTACCCAGCAGAGCTCTCACTCACATCTTGGATATGCTTTTTGGGCATTTTTGAGGGTGCAATTGCAACCTTTATATTTGAACGTGATATGAGTGTTTGGTCCATTGGCTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGGAGTGGTGTGTTCTGGAATTGCATATTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCAGTTTTTGTGACTTCTTTCAGTCCTCTAATTATGATTATCACTGCTGCATTGGGTACCATTGTCTTGGCTGAGCAAATTCATCTTGGAAGCGTAATTGGAGCTATTGTAATTGTTTGTGGGCTATACACTGTGGTATGGGGGAAAAGCAAAGACAATGTGAATAATACAGAAGCAGTGAAAGTTGAGGGCCAAGAATTGCCAATAAGGGATAGCACAAAATCAGGATCAAACATTTTTGAAAACATTGATGTTAATGTTCCTAGTGAGATAAAATGA 1137 0.4239 MEEQNGMGKLLKKLKPYLAMVSLQFGYSGMYVITMVSFKHGMSHWVLSVYRHVIATLIMLPFAFVLERKIRPKMTLPIFLRLAALGFLEPVLDQNLYNMGMKSTSTTFASAIVNVLPAITFVMALIFRLETVNLRKIHSVAKVIGTMVTVSGAMIMTLYKGPALEFIKGHGGGAIHHDSRNGSRTEPSEQNWVIGTLMLIASCGGWASFFILQSLTLKMYPAELSLTSWICFLGIFEGAIATFIFERDMSVWSIGWDSRLLACVYSGVVCSGIAYYVQGVVTRERGPVFVTSFSPLIMIITAALGTIVLAEQIHLGSVIGAIVIVCGLYTVVWGKSKDNVNNTEAVKVEGQELPIRDSTKSGSNIFENIDVNVPSEIK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01979 378 PANTHER WAT1-RELATED PROTEIN 11 359 - -
Aip10g01979 378 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Aip10g01979 378 Pfam EamA-like transporter family 28 145 IPR000620 GO:0016020|GO:0016021
Aip10g01979 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 336 - -
Aip10g01979 378 PANTHER WAT1-RELATED PROTEIN 11 359 IPR030184 GO:0016021|GO:0022857
Aip10g01979 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01979 Aip-Chr10 78700574 78710618 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01979 8 378 Nodulin-like Gene Family AT4G08300 61.765 5.16e-166 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01979 - - gmx:100814921 623.239