Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01975 ATGGAGATAGAAGTTACATGGAGGAATGTTGAAGAGGAGAGAGTGGCCAGAGATAGAAAAGCTTTCCTGCTGCACAGTCAATTTGTTGATATCTCGATATTCATGACCATCAAGGCAATACAGCATGTTATGGAATCCAATATAAAGAATGAATCAAATTCTCCAATTTCAATTCTACATAAAGAGCGCGTAGGAGACTTATATGCATCATCTGAATTGGCCACTGATGTTACCATTAATGTTGGTGAAGTTAAGTTTTACCTTCATAAGTTTCCTCTATTATCGAAGAGCAAGCGATTACAGAAGTTGATGTCGAAAGCTAGTGAAGAGGATTCTGATGATATTTACTTAGATGATTTCCCAGGAGGACCTAAGGCCTTTGAAATAAGTGCAAAATTCTGTTATGAAATGACGGTTACTCTTAATGCTTACAATGTTGTAGCTGCTTGCTGTGCGGCCGAATATCTTGAGATGACTGAGGATATTGATTTGGGAAACTTGGTTTTTAAAATTGAAGTGTTCCTTAACTCAGGAATCTTCTGTTGCTGGAAGGATTCTATAATAGTCCTCCAAACTTGTAATTCTTTTCTGCCATGGTCTAAGGATCTGAATATCATTGAGAGATGCATAGGTTTCATCTGTCATGTTAAAATTAGAAGTGTTATGTTGACAGATATAGAGGAGGTATATGTAATTTCCTCTAACATTTATGAATGA 717 0.364 MEIEVTWRNVEEERVARDRKAFLLHSQFVDISIFMTIKAIQHVMESNIKNESNSPISILHKERVGDLYASSELATDVTINVGEVKFYLHKFPLLSKSKRLQKLMSKASEEDSDDIYLDDFPGGPKAFEISAKFCYEMTVTLNAYNVVAACCAAEYLEMTEDIDLGNLVFKIEVFLNSGIFCCWKDSIIVLQTCNSFLPWSKDLNIIERCIGFICHVKIRSVMLTDIEEVYVISSNIYE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01975 238 SUPERFAMILY POZ domain 68 162 IPR011333 -
Aip10g01975 238 Pfam BTB/POZ domain 71 162 IPR000210 GO:0005515
Aip10g01975 238 PANTHER OS12G0117600 PROTEIN 60 214 IPR043454 -
Aip10g01975 238 ProSiteProfiles BTB domain profile. 75 143 IPR000210 GO:0005515
Aip10g01975 238 Gene3D Potassium Channel Kv1.1; Chain A 50 175 IPR011333 -
Aip10g01975 238 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY5 60 214 - -
Aip10g01975 238 SMART BTB_4 75 173 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01975 Aip-Chr10 76902980 76905124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01975 56 213 EF-hand Containing Proteins AT3G44820 36.025 6.85e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip10g01975 BTB 2.1e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01975 - - aip:107620912 276.174