Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01970 ATGGAAAATTTATGTGGTGCTAGCTTTGGTAAGATGATGAATAAGGCAAGGCCTTATTTGCTAACTGTGGGATTGCAATTTGGGATGGCAGGGACGTACCTCTTCACCATGGCTAGCCTTAACTATGGAATGAATCGTTTGGTGTTCATTGTTTATCGCAATGCCATAGCTGCATTCTCCCTTGCCCCTTTTGCATTGATTTTTGAAAGGAAAGTGAGGCCAAAGATGACAATCTCTGTATTCTTCCAGATAGTGGCTCTCGGATTTCTAGAGCCGGTGATTGATCAAGGGTTCACTTTCTTGGGGATGCAATACACTTCAGCTTCATTTGCATCAGCTGTTATGAACGCCGTGCCCTCTGTCACCTTCGTGCTTGCAGTGCTTCTCAGGATCGAGCGCATAAAAATAAAGGAGATAAGGAGTCAAGCAAAATTGCTTGGAACCTTAGTAACTTTTGCAGGGGCTATGCTGATGACGCTTTACAAAGGCCCTGCAGTCAACTTGTTTCATTCATCAAACACGATGCATCAGAATGCTCAAACTCACTCTCTTGATTCTCACAAAAACTGGATTACCGGCACACTTTTCATATTCCTTGGTTGTATTGCTTGGTCTTGTTTCTACATTTTGCAGTCCATAACAGTGAGAAGGTACCCAGCAGAACTATCACTATCATCGTTGATATGCTTGGCGGGTACTTTTGAAAGTGCAGTGGTTGCTCTCATTTCAGATCATCGCCCTCAAGCGTGGGCAATTGGCTGGAACTACACCCTCTACGGTCCTCTCTACACTGGAATAGTGAGTTCAGGAATTGCATATTATATACAAGCGTTAGTAATGCAAAGCAGAGGACCAGTGTTTGTAACGTCTTTTAATCCGCTTTGCATGATCATCGTTGCTGCTTTGGGATCCTTCCTACTAGGAGAACAGCTCCACCTTGGAAGCATTATTGGAGGTATTATTATCGCAGTAGGGCTTTACTCTGTGGTGTGGGGTAAAGGAAAAGACTACACAGACCTCACAACATCATCAACAACAATAAAGGAAACTGAAACTCAGCAGCTTCCAATTACCTCACCAACTGAAAAATAA 1092 0.4332 MENLCGASFGKMMNKARPYLLTVGLQFGMAGTYLFTMASLNYGMNRLVFIVYRNAIAAFSLAPFALIFERKVRPKMTISVFFQIVALGFLEPVIDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVLLRIERIKIKEIRSQAKLLGTLVTFAGAMLMTLYKGPAVNLFHSSNTMHQNAQTHSLDSHKNWITGTLFIFLGCIAWSCFYILQSITVRRYPAELSLSSLICLAGTFESAVVALISDHRPQAWAIGWNYTLYGPLYTGIVSSGIAYYIQALVMQSRGPVFVTSFNPLCMIIVAALGSFLLGEQLHLGSIIGGIIIAVGLYSVVWGKGKDYTDLTTSSTTIKETETQQLPITSPTEK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01970 363 PANTHER WAT1-RELATED PROTEIN 12 356 IPR030184 GO:0016021|GO:0022857
Aip10g01970 363 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Aip10g01970 363 Pfam EamA-like transporter family 27 159 IPR000620 GO:0016020|GO:0016021
Aip10g01970 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 334 - -
Aip10g01970 363 PANTHER WAT1-RELATED PROTEIN 12 356 - -
Aip10g01970 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01970 Aip-Chr10 76074386 76079297 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01970 13 337 Nodulin-like Gene Family AT2G37460 51.227 3.09e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01970 - - gmx:100777641 564.688