Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01957 ATGCTTGCTGATCCAAAGGAGGCTCAAGCCAGAATCAGGGAGGTCCATTTTCTTCCATTCAATCCTGTAGACAAGAGGACTGCTCTAACTTACATTGATTCTGATGGAAATTGGCACCGTGTGAGCAAAGTGGCTTCGGCAAAAGAAGATGCATTTGTTGGAGGATTCCTTTCACAATTGGTTCAGGAGCAGCCAATCTCAGAATGGGTTAGAGCTGGTTGCTATGCAGCAAATGTAATCATCCAAAGGTCTGGCTGCACATACCCAGAGAAGCCCGATTTTCAATGA 288 0.4549 MLADPKEAQARIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKVASAKEDAFVGGFLSQLVQEQPISEWVRAGCYAANVIIQRSGCTYPEKPDFQ 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01957 95 Gene3D - 1 51 IPR023299 GO:0000166
Aip10g01957 95 PANTHER CALCIUM-TRANSPORTING ATPASE 1 46 - -
Aip10g01957 95 Pfam pfkB family carbohydrate kinase 50 89 IPR011611 -
Aip10g01957 95 PANTHER PLASMA MEMBRANE ATPASE 1 46 - -
Aip10g01957 95 Gene3D - 52 94 IPR029056 -
Aip10g01957 95 SUPERFAMILY Ribokinase-like 50 88 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01957 Aip-Chr10 70395113 70395801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01957 1 45 Primary Pumps ATPases AT2G18960 93.333 7.31e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01957 K00856 K01535 gmx:100789494 90.8929