Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01956 ATGGAGAGAGAGGATGAAGATGCGACGCAAGAGAGGAAGCTGTTCCGCCGTGCACTGTCGTTGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTAGGGCTTGCCGTGCTCCTGTCCGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGCAAGGGGATTGCAGTACCTTCATGAGGATTCATATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTAATCCCAAGATTGGAGACTTTGGCCTTGCCAGTTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTTCTCAAACCTGAGTACGCAACACATATCATAGGGGAGTGGTGTGAGCTTATGAATGAATCTGCGCCAAAAGGGCTGTTTTCGCCGGAGCCAGAATATTATCGAGGACCAAAGCTGAAAGTTGCCATCATTGGATTTGGGCTTTCTGGCATGTCAACTACAGTGGAACTCTTGGATCAAGGACACGAGGTTCAGCTCCTTTAA 555 0.4811 MEREDEDATQERKLFRRALSLLLGSIEAAAAARACRAPVRNNADRFLNWSTRFQIVLGVARGLQYLHEDSYLRIVHRDIKASNILLDHKFNPKIGDFGLASFFPEDQAYLSTQFAGTFLKPEYATHIIGEWCELMNESAPKGLFSPEPEYYRGPKLKVAIIGFGLSGMSTTVELLDQGHEVQLL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01956 184 Gene3D Transferase(Phosphotransferase) domain 1 36 159 - -
Aip10g01956 184 SUPERFAMILY Protein kinase-like (PK-like) 45 124 IPR011009 -
Aip10g01956 184 Pfam Protein kinase domain 54 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01956 184 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 42 125 - -
Aip10g01956 184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Aip10g01956 184 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 42 125 - -
Aip10g01956 184 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01956 Aip-Chr10 70101490 70102682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01956 26 124 Receptor kinase-like Gene Family AT1G53420 54.455 3.13e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g01956 Pkinase 1.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01956 - - ahf:112703114 170.244