Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01947 ATGTATGGTACTAGACTCTTGATAAATCCGGATATTCCCGAGGCTTTGATGCTTCGAAAAAGCGTGTACTATAGAGAGATCTCGCAGTACCTATCTGTGATTTCTGGCAAACCGGCATATCTTGATGAAGATGAGGTTTTATATTCCACTAGGAGGAAGACAATAAAGGAGTTACGTGCGGTTGCGGATGTTGGATTCTATGTTGTTCGGGCCACTGTTCTTGATGTTGAACCCGTTTCAAGTTGGTGGTATAAATCATGTCTTTGCAGCGTGAAGGCAGAAGCTAATGCGGATGAATACTTCTGCGACGGCTGTAATAGGGACGTGAATAATGTGGTTGACAGGTATAAGTTGAATTTGTTGGTTTTTGATGGTACTGCTACAACGAATTTCGTTGTGTTCGATAAGGAGGTCGTAGCTCTATTCGGACGAACCTGTACTGAGATGGTGAAAGAGTTGAATAAAAAAGGGGAAGCAAGCAAAGATCCTATTGGTTTTAATGAGTTTTTCCTTGATAAGGAGTTTCTATTCAAGGTCGAAGTAGAAACTACTGGATGGTGCGATTCTTATGATGTATCGGTGATACGTTCTGATTCCGAGGTGGAGGGACAATCAAGGCCCGGTAAAATCTGA 633 0.4218 MYGTRLLINPDIPEALMLRKSVYYREISQYLSVISGKPAYLDEDEVLYSTRRKTIKELRAVADVGFYVVRATVLDVEPVSSWWYKSCLCSVKAEANADEYFCDGCNRDVNNVVDRYKLNLLVFDGTATTNFVVFDKEVVALFGRTCTEMVKELNKKGEASKDPIGFNEFFLDKEFLFKVEVETTGWCDSYDVSVIRSDSEVEGQSRPGKI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01947 210 CDD RPA1_DBD_C 53 182 IPR013955 -
Aip10g01947 210 Gene3D - 43 202 IPR012340 -
Aip10g01947 210 SUPERFAMILY Nucleic acid-binding proteins 51 191 IPR012340 -
Aip10g01947 210 Pfam Replication factor-A C terminal domain 66 188 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01947 Aip-Chr10 69275780 69277049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01947 4 158 Core DNA Replication Machinery Family AT5G61000 26.347 1.44e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01947 - - aip:107620728 386.341