Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01931 ATGATTTTAGATCTAAATGAATGGTCAACTAGTTATTGTTACTTTGTTATTTGTTCAGTGCAAGTTTTGTTTTTTCTATTGCGTGTTTTAAGAGATGGCTACTGGAGTGAACAACATGCTGCAATTTTCACACCAGGAGGCATAATCAACATTAAATTAGGAGATATCATTCCGGCTGATGCTTGTCTTCTCGAGGGCAATCCTCTAAGTGTTGATCAGTCTGCTTTAACAGGAGAATCTCTTCTAGTGACCAAGAACCCCACTGATGAAGTGTTTTCTGGATCAACAGTCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGTGTGCACACCTTCTTTGGTAAAGTGGCTCACTTGGTTGACAGCGCTAACCAATTTGGACACTTCAAGAAAGTGCTTACAGCAATTGGTAACTTCTTCATTTGCTCAATTGCTCGAGACGTATGA 453 0.4018 MILDLNEWSTSYCYFVICSVQVLFFLLRVLRDGYWSEQHAAIFTPGGIINIKLGDIIPADACLLEGNPLSVDQSALTGESLLVTKNPTDEVFSGSTVKKGEIEAVVIATGVHTFFGKVAHLVDSANQFGHFKKVLTAIGNFFICSIARDV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01931 150 PANTHER CALCIUM-TRANSPORTING ATPASE 27 148 - -
Aip10g01931 150 PANTHER PLASMA MEMBRANE ATPASE 27 148 - -
Aip10g01931 150 Pfam E1-E2 ATPase 28 144 - -
Aip10g01931 150 SUPERFAMILY Calcium ATPase, transduction domain A 27 122 IPR008250 -
Aip10g01931 150 Gene3D - 110 147 - -
Aip10g01931 150 Gene3D - 27 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01931 Aip-Chr10 67844219 67844671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01931 28 147 Primary Pumps ATPases AT4G30190 81.667 1.16e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01931 K01535 - gmx:100794372 199.519