Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01894 ATGCTCTGCTGCCTTCCCTTCTTTTTTGGATTTGCGGTTTTTCTTGGAATGCACTTCCCTCCATTAATGGCTGATTGCCCTTTGGATTTTTCCGCTTCAAACTTTACACTGGCTTCCTCTCTATGTTCTAACCAAGGTGATAGGGGAAACTGTTGCCGCTACATTAATGCTAATGTTGCAATTTCTGTTGCTCGTTTCGCTAATTCAACGAGCATCCTGGGGGTCCCTCCAAATGACTCTGTTTCCTGCCTCCAAACTATATCTGATAAGTTACAACTTAATGGAGTTCCACAAAATGCAACAGCTTTCTGTGGTTTTGGGACCAAAATTCCTGTGAATTATGAATGTAAGGGACGGACTAGTGTCATGCAAATGCTGCAATCTCCTAGATTCGCGGAGGTCACAAAAAATTGCAAAGTGTCACTTGGAGAGGAAAGAAAATGTAGGAAGTGCTTAAATGCAGGCTTTGGTTATCTGCATCATTTGGGAATTAATGATAATATAACACTCAGTACTTGTCGTGATGCAACTTTTGCTGCACTTGCAAGCCAACTTGATCACCAATCTACAACTGACATTGCAAGCTGTTTCTTTGGTGTTCAAGGACTTCTTGGGCCTCCTGTGTCATCGTCCCCATCCTTGCCGAGTCCCGAGGCTTCTCCAAGTCCAGTGGTTGCTGATAGTCCAAGCCAACTATTGTTAGGTGCACCTTTTAAGGGAAACCACCATACATATCACTTGACATTAGTTCCAGGTATTGCTATTGCCGTCACCGCTGTTGCTGTTGGGATGCTCATAGTCTTGATAGTTCTAATTCGTAAAAAAAGCAGAGAGCTAGACGATCCTGATGATTTCGGAAAAACTTCTTCAAAAACCATGCCTCCTTTTGCAACATGGAAGTTTCAGGAAGGTTCTTCAACTATGTTCCGAAAATTTAGCTACAAGGAGATAAAGAAGGCAACAGAGGATTTTAGCACCGTCATCGGGCAAGGGGGATTTGGAACAGTGTATAAAGCTCATTTTAGTGATGGCCTGGTGGCAGCAGTGAAGCGCATGAACAGAGTGTCAGAGCAGGGAGAGGATGAGTTCTGCCGAGAAATCGAACTTCTTGCACGGCTGCACCATCGGCATCTTGTTTCTTTAAGAGGCTTCTGCATAAAAAAACACGAGAGGTTTCTGATGTATGAGTACATGGGAAATGGGAGCTTGAAAGATCATCTTCATTCTCCTGGTAGAACACCACTAAGTTGGCGAACTAGAATCCAAATTGCGATTGACGTAGCTAATGCATTGGAGTACCTTCATTTATATTGTGATCCTCCTCTGTGCCATAGAGACATTAAGTCTAGCAACACTTTGCTGGATGAGAATTTTGTTGCTAAGATAGCCGATTTTGGCCTTGCACAGGCATCAAAAAATGGTTCGATATGCTTTGAACCTCTAAACACTGAAATCCGAGGAACTCCAGGTTATATGGATCCAGAATATGTTGTTACTCAAGAGCTTACCGAGAAAAGCGATATCTACAGTTTCGGGGTGTTACTACTAGAAATCGTGACAGGAAGGCGAGCTATTCAGGATAATAAGAACTTGGTGGAATGGGCGCAACCGTATATGGAATCCGAAACCAGATTATTGGAGTTAGTAGATCCCAACGTGAGGGAGTCTTTTGACTTGGATCAACTCCATACAGTAGTGTCTATAGTAGGATGGTGCACCCAGAGAGAAGGAAGGGCAAGGCCTTCAATAAAACAGGTTCTTCGGCTTCTTTATGAGACGTCAGAACCAATGCACAGTGGTTTCCTACAATCCGGCGATGATGAAGACTGTCAGGGAAGTCAGCAGAGAGGCAGAAGAAGCAAGGGGAAAATGCACCGGAATGAAGCGATTTTCAACAGCGGCGATGGAAGATACCTTGCCTCGTCCTCAAGCACGTCTCGATCGTATTGCAGTAGGACCTTTTTACTCGAGAGTTGCTCTCCGCAGTCGCCGCCAAATATTTTCTCAGTTTAA 2013 0.4401 MLCCLPFFFGFAVFLGMHFPPLMADCPLDFSASNFTLASSLCSNQGDRGNCCRYINANVAISVARFANSTSILGVPPNDSVSCLQTISDKLQLNGVPQNATAFCGFGTKIPVNYECKGRTSVMQMLQSPRFAEVTKNCKVSLGEERKCRKCLNAGFGYLHHLGINDNITLSTCRDATFAALASQLDHQSTTDIASCFFGVQGLLGPPVSSSPSLPSPEASPSPVVADSPSQLLLGAPFKGNHHTYHLTLVPGIAIAVTAVAVGMLIVLIVLIRKKSRELDDPDDFGKTSSKTMPPFATWKFQEGSSTMFRKFSYKEIKKATEDFSTVIGQGGFGTVYKAHFSDGLVAAVKRMNRVSEQGEDEFCREIELLARLHHRHLVSLRGFCIKKHERFLMYEYMGNGSLKDHLHSPGRTPLSWRTRIQIAIDVANALEYLHLYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKNGSICFEPLNTEIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMESETRLLELVDPNVRESFDLDQLHTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQSGDDEDCQGSQQRGRRSKGKMHRNEAIFNSGDGRYLASSSSTSRSYCSRTFLLESCSPQSPPNIFSV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01894 670 Pfam Protein kinase domain 326 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01894 670 Pfam SPARK 24 162 IPR043891 -
Aip10g01894 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Aip10g01894 670 PANTHER BNAC06G02630D PROTEIN 11 670 - -
Aip10g01894 670 PANTHER OS01G0750732 PROTEIN 11 670 - -
Aip10g01894 670 CDD STKc_IRAK 328 590 - -
Aip10g01894 670 Gene3D Phosphorylase Kinase; domain 1 291 397 - -
Aip10g01894 670 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Aip10g01894 670 Gene3D Transferase(Phosphotransferase) domain 1 398 610 - -
Aip10g01894 670 SMART serkin_6 322 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01894 670 MobiDBLite consensus disorder prediction 601 627 - -
Aip10g01894 670 ProSiteProfiles Protein kinase domain profile. 322 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01894 670 SUPERFAMILY Protein kinase-like (PK-like) 302 593 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01894 Aip-Chr10 59985502 59990155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01894 18 669 Receptor kinase-like Gene Family AT3G19300 60.122 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Aip10g01894 Pkinase 9.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01894 - - ahf:112715638 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01894 10 59985502 59990155 Aip10g01894 10 59985502 59990155 ECH