Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01885 ATGAATGTAAACTTACTGAAATTTGAAGTTGTAGAACAGCTTAGCAGGTTTAAAACAACCGAAGGAATCTGGATTGCTCGGTGTGCAGGCATTAAGCCTTGCACACTTGTGTTGGATTTGGAGGGAACTGATGGAAAAGAGCAGGGAGAAAAGTTCCTGGTGTACAAGAAGGCACTCCAAAGCACTGGTGTTGATCCCCAACCTATCATCACTGTTGCCAAGGCAGTCGTGGACACTGCACAACAAACAACCAAGGTGATTGAAGGTGCGAAGCCAATAGCTTCGACGACAGTTAAAACAATATCTTCTTCAGATCCTACTGTGATTTCTGGAACAGGTGGAGCACTCTTTATTGCATACCTCTTACTTCCTCCAATTTGGTCTGGCATCACCTTCAACTTCCGTGGTTACAAAGGTGATAACTACCAAGAGAGCTCAGAGGACTTGTTAGGAATGGATTTCCTTGAAGATAAATTCAATCTTGGGTACACTATAGTGCAGAATTTTGGTGGTGAACTATTTGTTGCAGTTCTGGATTTCTCTCCCTTCGATGTTGTTGCTTGGCATGGAAATAATAATAATAATAATAATAATAATAATAATAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCCAAGCTGTGAAAGATAA 702 0.3989 MNVNLLKFEVVEQLSRFKTTEGIWIARCAGIKPCTLVLDLEGTDGKEQGEKFLVYKKALQSTGVDPQPIITVAKAVVDTAQQTTKVIEGAKPIASTTVKTISSSDPTVISGTGGALFIAYLLLPPIWSGITFNFRGYKGDNYQESSEDLLGMDFLEDKFNLGYTIVQNFGGELFVAVLDFSPFDVVAWHGNNNNNNNNNNNNKKKKKKKKKKKKKKKKKKKKKKKKKKPSCER 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01885 233 MobiDBLite consensus disorder prediction 201 233 - -
Aip10g01885 233 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 56 150 - -
Aip10g01885 233 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 56 150 IPR044690 GO:0009704|GO:0071277|GO:0090333
Aip10g01885 233 Pfam Homogentisate 1,2-dioxygenase N-terminal 155 192 IPR046452 -
Aip10g01885 233 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 7 54 - -
Aip10g01885 233 MobiDBLite consensus disorder prediction 190 233 - -
Aip10g01885 233 SUPERFAMILY RmlC-like cupins 160 192 IPR011051 -
Aip10g01885 233 Coils Coil 193 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01885 Aip-Chr10 57580417 57584176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01885 15 150 Sulfurtransferasese or Rhodanese AT5G23060 44.595 2.40e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01885 - - adu:107469155 152.91