Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01881 ATGCATGCTGTTGTTGATGAAGATGTGTGCTTCCTGTTTCTCACAGAGTTCTTGCAGTTTGAACGGTTTCTTGATTACAGCAGCAACAACAATTACCAGCCACAATCTCAGACTCTAAGCAGAAGATCAGATGATGGTTACAATTGGAGAAAATATGGTCAGAAACAAGTGAAAGGTAGTGAGAATCCAAGAAGTTACTATAAATGCACATTCCCGAATTGCCCAACAAAGAAGAAAGTTGAGAGATCCTTGGATGGACAAATCACAGAGATTGTTTATAAGGGTACTCATAATCACCCTAAGCCTCAGAATACTAGGAGAAACTCTTCATCTTCTTCTAATTCTACTGCTTTTGCAATTGCTCCCTCCAATCAAATGAACAACTCTGAGGTGACTGATCATCAATCTTATACACATGGTAGTGGACAAATGGATTCTATTGCCACCCTTGAGAACTCCTCAATTTCAGTTGGGGATGATGATTTTGAACAAAGCTCTCAGAGGTGTAAATCAAGTGGAGATGATTATGATGATGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGGGAAAATGAGGGAATATCAGGAGGTGGAAGTAGAACAGTGAGAGAACCAAGGGTTGTGGTTCAGACAACAAGTGACATAGATATCCTTGATGATGGCTACAGATGGAGGAAGTATGGCCAAAAAGTAGTTAAGGGCAATCCAAATCCAAGTCTAACTCAACTGTGTCATCATTTGGATTATGAAACAGATCTCGAGGATGTGAAGTATTGGAGTTGGCACAATGAGATCGAGTCTCCATTTGGAACTGGGAACACCGCCAATGCTTCTCTGCTCTCTGCTCACCCAGTCTTCGTCAAGAATTTGTTTCAATATATGTTCAATTCAGTCGCAGATGTTAGGTGCTCTATTTGA 921 0.405 MHAVVDEDVCFLFLTEFLQFERFLDYSSNNNYQPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSSSSNSTAFAIAPSNQMNNSEVTDHQSYTHGSGQMDSIATLENSSISVGDDDFEQSSQRCKSSGDDYDDDEPDAKRWKIEGENEGISGGGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPSLTQLCHHLDYETDLEDVKYWSWHNEIESPFGTGNTANASLLSAHPVFVKNLFQYMFNSVADVRCSI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01881 306 SUPERFAMILY WRKY DNA-binding domain 211 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 SMART WRKY_cls 43 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 SMART WRKY_cls 219 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 MobiDBLite consensus disorder prediction 98 142 - -
Aip10g01881 306 ProSiteProfiles WRKY domain profile. 214 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 32 239 - -
Aip10g01881 306 MobiDBLite consensus disorder prediction 163 191 - -
Aip10g01881 306 MobiDBLite consensus disorder prediction 157 201 - -
Aip10g01881 306 MobiDBLite consensus disorder prediction 93 142 - -
Aip10g01881 306 ProSiteProfiles WRKY domain profile. 44 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 239 IPR044810 GO:0003700
Aip10g01881 306 Pfam WRKY DNA -binding domain 220 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 Pfam WRKY DNA -binding domain 44 100 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 Gene3D WRKY domain 206 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 SUPERFAMILY WRKY DNA-binding domain 42 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g01881 306 Gene3D WRKY domain 28 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01881 Aip-Chr10 57230148 57233789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01881 41 245 WRKY Transcription Factor Family AT2G38470 62.385 2.10e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip10g01881 WRKY 6.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01881 K13424 - aip:107621821 423.705