Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01875 ATGGCTGAGTTCATTGTAAAAGATGACGTCAGGAAAGCTTATAATAGAGATCCTGGACTTGCTGCTGGCCTTGTTAGAATGCATTTTCATGATTGCTTTGTTAGAGGATGTGATGGATCAATGCTCCTTGATTCTACTCCCTCGAACACAGTAGAGAAAGACTCTCTGGCGAATAATCCGAGTCTCAGAGGGTTTCATGTCATAGACAGTGCCAAGGCTAGGATTGAAGCTGTGTGCAAAAGAGTTGTTTCCTATGCAGATGATGACTAG 270 0.4296 MAEFIVKDDVRKAYNRDPGLAAGLVRMHFHDCFVRGCDGSMLLDSTPSNTVEKDSLANNPSLRGFHVIDSAKARIEAVCKRVVSYADDD 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01875 89 ProSiteProfiles Plant heme peroxidase family profile. 1 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g01875 89 SUPERFAMILY Heme-dependent peroxidases 2 87 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip10g01875 89 Gene3D - 1 88 - -
Aip10g01875 89 PANTHER PEROXIDASE 1 87 - -
Aip10g01875 89 ProSitePatterns Peroxidases active site signature. 21 32 IPR019794 GO:0004601
Aip10g01875 89 PANTHER PEROXIDASE 25-RELATED 1 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g01875 89 Pfam Peroxidase 6 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip10g01875 89 PRINTS Plant peroxidase signature 63 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip10g01875 89 PRINTS Plant peroxidase signature 23 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01875 Aip-Chr10 54936603 54936983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01875 1 87 Peroxidase AT4G33420 62.069 2.54e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01875 K00430 - egr:104433988 148.288