Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01874 atgaagaatggagTCAATGCACGTTTTGACTGTGCCATCGCTGCCGCTAGAAGAGCACTCAACCGCAACAAAGGCAACGACTGGCCTTCTGCTTTCGGCGCTCATCGAGCCCGCTATCTCCGCGCCATCGCTGCCAAGGTCGTCGAGAGAAAGGATCACCTCGCTAAGCTTAAATCCCTTGATTGCGGAAAACCACTCGATGAAGCTGCCTGGGACATGAATGATGTTGCTGGTTGCTTCGAGTTTTACGCTGACCTTGCCAAGAACCTCGACGCTAAGCAGAAGGCACCTGTTTCTCTTCCCATGGAAACTTTCAAGATTTATGTCCTCAAAGAATCCATTGGTGTTGTTGGATTAATCACCCCATGGAACTATCCTCTATTAATGGCTACATGGAAGGTTGCCCCTGCTCTGGTTCTTCATTTTTTTGATTTTTCTAAACTACTCAAAAAGGTGAAAGAGATATACAATTTTTCCCAGGATGATCTGATGACAGAAGATATATTCATCTTGGGTTGTCACTCTGAAATCTTTGTCTGGGTTGGCCAGGGAGTTAACCCCAAGAGCAGAATGCAGTCTCTAACCATTGGTGAGGCCAACAATGCTTACATATTCCCTGGTTTTGGCTTGGGTTTGATTATCTCAAGTGCAATCTGCGTCCGCGATGAGATGCTCTTGGCAGCCTGTCTTGCTTCTCATCTACCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCTGGCTACAGAAACTACCATTGA 774 0.4574 MKNGVNARFDCAIAAARRALNRNKGNDWPSAFGAHRARYLRAIAAKVVERKDHLAKLKSLDCGKPLDEAAWDMNDVAGCFEFYADLAKNLDAKQKAPVSLPMETFKIYVLKESIGVVGLITPWNYPLLMATWKVAPALVLHFFDFSKLLKKVKEIYNFSQDDLMTEDIFILGCHSEIFVWVGQGVNPKSRMQSLTIGEANNAYIFPGFGLGLIISSAICVRDEMLLAACLASHLPRPKDLVKYAESCMYSPGYRNYH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01874 257 Gene3D Severin 141 246 IPR029006 -
Aip10g01874 257 Pfam Gelsolin repeat 155 189 IPR007123 -
Aip10g01874 257 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 9 139 - -
Aip10g01874 257 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 192 255 IPR036291 -
Aip10g01874 257 Pfam Aldehyde dehydrogenase family 6 139 IPR015590 GO:0016491
Aip10g01874 257 Pfam Malic enzyme, NAD binding domain 192 229 IPR012302 GO:0051287
Aip10g01874 257 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 136 196 IPR036180 -
Aip10g01874 257 SUPERFAMILY ALDH-like 9 139 IPR016161 GO:0016491
Aip10g01874 257 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 6 139 IPR016162 GO:0016491
Aip10g01874 257 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 9 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01874 Aip-Chr10 54827264 54830353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01874 10 138 Aldehyde Dehydrogenase Gene Family AT1G74920 79.845 2.82e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01874 K00130 - cpap:110816839 212.616