Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01871 ATGGCGGCGCAGCCCCTCGAGCAGGTCCAATGCTTCGGTCGCAAGAAAACGGCGGTTGCGGTTACCTACTGCAAGCGCGGCCGCGGGCTCATCAAGATCAATGGCTGCCCAATCGAGCTTGTTGAGCCTGAGATCCTACGGTTCAAGGCCTTCGAGCCGATTCTTCTGTTAGGGCGGAGCCGCTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGCGGTGGACACACTTCTCAGATCTACGCCATAAGGCAGAGCATAGCGAAGGCGCTGGTTGCGTTCTACCAGAAGTACGTTGATGAACAGAGCAAGAAGGAGATCAAGGACATTCTCGTCAGGTACGATAGGACCTTACTTGTTGCTGATCCAAGGCGCTGTGAGCCTAAGAAGTTCGGTGGTCGTGGCGCTCGCGCGAGGTTCCAGAAATCTTACCGTTAG 438 0.5708 MAAQPLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01871 145 Pfam Ribosomal protein S9/S16 13 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Aip10g01871 145 Gene3D - 1 145 IPR014721 -
Aip10g01871 145 PANTHER RIBOSOMAL PROTEIN S9 4 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Aip10g01871 145 ProSitePatterns Ribosomal protein S9 signature. 73 91 IPR020574 GO:0003735|GO:0005840|GO:0006412
Aip10g01871 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 8 145 IPR020568 -
Aip10g01871 145 PANTHER - 4 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01871 Aip-Chr10 54507055 54507948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01871 1 145 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 87.671 4.83e-93 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01871 K02960 - mnt:21383843 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01871 10 54507055 54507948 Aip10g01871 10 54507055 54507948 ECH