Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01870 ATGGCTACATGGAAGGTTGCCCCTGCTCTGGCAGCTGGTTGTGCTGCAATATTGAAGCCTTCCGAATTGGCATCTGTGACATGTTTGGAGTTGGCTGACATATGCAAAGAATCTAAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAGAAAATTATGGAGCTTGAGGAGGAAAAAAGAAAAGTGCAGATTTCTAAAGCATGA 222 0.4324 MATWKVAPALAAGCAAILKPSELASVTCLELADICKESKMKRIGIDTEALKEHFGKKIMELEEEKRKVQISKA 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01870 73 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 63 IPR016162 GO:0016491
Aip10g01870 73 SUPERFAMILY ALDH-like 1 38 IPR016161 GO:0016491
Aip10g01870 73 Pfam Aldehyde dehydrogenase family 1 38 IPR015590 GO:0016491
Aip10g01870 73 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01870 Aip-Chr10 54419297 54420420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01870 1 37 Aldehyde Dehydrogenase Gene Family AT1G74920 89.189 4.85e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01870 K00130 - aip:107648747 138.658