Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01856 ATGGAATGCAACCTATACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGCCTGCAAATGGAGATTTATACTATGGTCTATTCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCCTCCTCTTTTCCCTGGTGCCAGGTCATCAAAGGCACCTGATGTATCAAAACTAGTTTTCGGAAGCAAATTGCCTATTCTAAGTGATGAAAAACTATCATTGAAGGTATTGCTTTCCGAGGCAAAAAAATGA 399 0.4211 MECNLYQLMKDREKMFSEGEVRNCLQMEIYTMVYSDFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLPPLFPGARSSKAPDVSKLVFGSKLPILSDEKLSLKVLLSEAKK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01856 132 Gene3D Transferase(Phosphotransferase) domain 1 34 99 - -
Aip10g01856 132 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 35 106 - -
Aip10g01856 132 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 26 - -
Aip10g01856 132 SUPERFAMILY Protein kinase-like (PK-like) 2 98 IPR011009 -
Aip10g01856 132 SMART serkin_6 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01856 132 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 26 - -
Aip10g01856 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01856 132 Pfam Protein kinase domain 35 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01856 132 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 35 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01856 Aip-Chr10 52041104 52043250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01856 35 95 MAP Kinase Gene Family AT4G11330 57.377 3.82e-19 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip10g01856 Pkinase 4.7e-18 CL0016