Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01846 ATGCCACTGCTGATCGAAACTGCGCGACATTATCGCAGGTTGCATCCAAAAAAAGTTCAGGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGATTCTGTCACTGTCTCCCGTGAGAAGAACAAGAGAGGATTAAGGATCCAAAATGAGGTCTGTGCCCTTCATTTCAGTCGGAATCAGTTGCGCTCAATGGGATAA 219 0.4658 MPLLIETARHYRRLHPKKVQEKFLQERIKVGGKAGALGDSVTVSREKNKRGLRIQNEVCALHFSRNQLRSMG 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01846 72 Pfam Ribosomal L22e protein family 20 58 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aip10g01846 72 Gene3D - 13 71 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01846 Aip-Chr10 49327862 49328708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01846 21 49 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 89.655 2.23e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01846 K02891 - csin:114291651 59.3066