Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01833 ATGTTTCTAGCAAAGACACTAAAAGCAGATGATTTGGCATCTTCGGTGGTAGGAACTCCCAACTACATGTGTCCTGAACTGCTTGCAGATATTCTTTACGAATTCAAATATGATATTTGGTCATTAGGGTGTTATGTATATGAAATGGCTGCTCATCGCTTTGCATTTAAAGCTTTTATCTCAGCAGGTTCTTCTTCTTCAAATTCTTGCAAGGCCATGGTGAAAGTTGCAAATAATAATAAGAGAAATTTCTGTAGCATTTTTTGTTGTAAcattgatgtaacatag 288 0.3368 MFLAKTLKADDLASSVVGTPNYMCPELLADILYEFKYDIWSLGCYVYEMAAHRFAFKAFISAGSSSSNSCKAMVKVANNNKRNFCSIFCCNIDVT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01833 95 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 3 64 - -
Aip10g01833 95 SUPERFAMILY Protein kinase-like (PK-like) 3 76 IPR011009 -
Aip10g01833 95 Pfam Protein kinase domain 3 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01833 95 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Aip10g01833 95 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g01833 95 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5 3 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01833 Aip-Chr10 46920369 46921766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01833 13 53 MAP Kinase Kinase Kinase AT3G06030 46.341 2.04e-07 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aip10g01833 Pkinase 8.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01833 K08857 - mus:103999381 97.4413