Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01819 ATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCCGTGGAGTGGATAGGTTGGATTGATTTTTTGAACTTGAGCAAGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGTACCATGGCTTCGGCGCGAGACGTTCCAGAAATGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCTCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGTGTACTTTTTAGACGCGCATAA 381 0.4908 MSDNYAEDEFYAVDSVEWIGWIDFLNLSKEDVLRFNFADVDIAFEFYQQYAKYHGFGARRSRNEKRGEVRIRQEFVCHRQGYRSSKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRCVLFRRA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01819 126 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 6 124 - -
Aip10g01819 126 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 124 - -
Aip10g01819 126 Pfam FAR1 DNA-binding domain 45 119 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01819 Aip-Chr10 46199746 46200126 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g01819 FAR1 9.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01819 - - ahf:112770447 234.187