Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01790 ATGGCTGAGCTTACTTCAACTCCATCCACTTCTAACAACGCCAATTTATCTTGTTTCCAACTGACGGTTTGCTTGTATGAATGGTGGCTGGTTAAAGCTAAACATGGATTCGAAGGAAAGCAGTTAGCCATTGGAGGCATTGCATCAAAAACAGAAGAATTAGTGCGTGTCTTCACCAGTGCTCCCATTGCGAAACGGCATGATCTGTTCTCTCTTGAGACCACAGATGGGGTTTATATTATCATAAGGGGTTTCATTGACAAGCAGCGCACCATTGATAATGGTTTCCCTCATGAGGTTTTCAATCATTTCTTATTTGGTTTTCCTCAAAACTGGGAAAGTTTTGCAGCAGATTTGATTAGGGATGAATCAACTATTGGCACTAATTTGGGTAGTGCTGTTCCTAAAAATGTATCATCAATTGATCCTGAGATCTTCTCTGCCGGCACAGCTCAAGAAAAATCTATCCTGTCTTCTTCGAAACCTTTAAAGGAAGCATTTGGAGCTCATGGGAAGCCACATGCTGAGGTTGAATGGCATGATTCTATCGCTACATGTGGGGTTAATGCTTCTCAAGGTAGTGGCAGCATTAGATGTGTTACCAGGTTTCATAACATGAAAGTCTGTCAGCAGAAGCAGCTAGCTTCTGGAATTACTCTCAAACATCCAGAGGAACTGAACAGTCCAGTGACACCAGTTCAGTTGCAATCTCTGGAAAAAGTGACTACAGAAAAAGTAAATACACCGTCGGAGCATCTCGATGAAAGCTCTACATCTAGAGTTTCTAGCACTTTATTTGAAAATAAAGAAGACTGTTCTAGGAGAAACAAAGCTACAAGTGAAAAAAGTCAGATCACGTGTGAAAGAAAAAGGACTAAATCTGCCACTGCAACCAAATATCCACGAAAAAGGGGTTTAAGCCCCTCGATCATTGGTGAGAAAGAGAAGATATCCTCAGTGTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAGGAAGGTTGCTTCTACCACCCCTAGAGTTTTGGCGTAACCAGATACCAATTTACAATGCAGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGAGAATTTGACATATTTTAGAGGTTCATGA 1122 0.4135 MAELTSTPSTSNNANLSCFQLTVCLYEWWLVKAKHGFEGKQLAIGGIASKTEELVRVFTSAPIAKRHDLFSLETTDGVYIIIRGFIDKQRTIDNGFPHEVFNHFLFGFPQNWESFAADLIRDESTIGTNLGSAVPKNVSSIDPEIFSAGTAQEKSILSSSKPLKEAFGAHGKPHAEVEWHDSIATCGVNASQGSGSIRCVTRFHNMKVCQQKQLASGITLKHPEELNSPVTPVQLQSLEKVTTEKVNTPSEHLDESSTSRVSSTLFENKEDCSRRNKATSEKSQITCERKRTKSATATKYPRKRGLSPSIIGEKEKISSVSALSSFKKSRSGRLLLPPLEFWRNQIPIYNADHEVTEIQGGASVENLTYFRGS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01790 373 MobiDBLite consensus disorder prediction 245 306 - -
Aip10g01790 373 Pfam SANTA (SANT Associated) 23 114 IPR015216 -
Aip10g01790 373 PANTHER MIS18-BINDING PROTEIN 1 8 199 IPR039110 -
Aip10g01790 373 PANTHER MIS18-BINDING PROTEIN 1 229 363 IPR039110 -
Aip10g01790 373 MobiDBLite consensus disorder prediction 267 295 - -
Aip10g01790 373 MobiDBLite consensus disorder prediction 252 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01790 Aip-Chr10 43230802 43234449 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip10g01790 SANTA 1.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01790 - - adu:107480063 400.208